Atomistry » Zinc » PDB 6rdc-6rg3 » 6ret
Atomistry »
  Zinc »
    PDB 6rdc-6rg3 »
      6ret »

Zinc in PDB 6ret: Cryo-Em Structure of Polytomella F-Atp Synthase, Rotary Substate 3C, Monomer-Masked Refinement

Enzymatic activity of Cryo-Em Structure of Polytomella F-Atp Synthase, Rotary Substate 3C, Monomer-Masked Refinement

All present enzymatic activity of Cryo-Em Structure of Polytomella F-Atp Synthase, Rotary Substate 3C, Monomer-Masked Refinement:
7.1.2.2;

Other elements in 6ret:

The structure of Cryo-Em Structure of Polytomella F-Atp Synthase, Rotary Substate 3C, Monomer-Masked Refinement also contains other interesting chemical elements:

Magnesium (Mg) 5 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Cryo-Em Structure of Polytomella F-Atp Synthase, Rotary Substate 3C, Monomer-Masked Refinement (pdb code 6ret). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryo-Em Structure of Polytomella F-Atp Synthase, Rotary Substate 3C, Monomer-Masked Refinement, PDB code: 6ret:

Zinc binding site 1 out of 1 in 6ret

Go back to Zinc Binding Sites List in 6ret
Zinc binding site 1 out of 1 in the Cryo-Em Structure of Polytomella F-Atp Synthase, Rotary Substate 3C, Monomer-Masked Refinement


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of Polytomella F-Atp Synthase, Rotary Substate 3C, Monomer-Masked Refinement within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Zn600

b:50.0
occ:1.00
 CE1 M:HIS252 2.3 45.1 1.0
CE1 M:HIS248 2.5 42.5 1.0
CD2 6:LEU105 2.6 39.5 1.0
NE2 M:HIS252 2.6 45.1 1.0
NE2 M:HIS248 2.9 42.5 1.0
OD2 6:ASP102 3.5 41.7 1.0
ND1 M:HIS252 3.6 45.1 1.0
ND1 M:HIS248 3.8 42.5 1.0
CD2 M:HIS252 4.0 45.1 1.0
CG 6:LEU105 4.1 39.5 1.0
CD2 M:HIS248 4.2 42.5 1.0
CG 6:ASP102 4.4 41.7 1.0
CG M:HIS252 4.4 45.1 1.0
CG M:HIS248 4.6 42.5 1.0
CD1 6:LEU105 4.7 39.5 1.0
OD1 6:ASP102 4.7 41.7 1.0
CB 6:LEU105 4.9 39.5 1.0

Reference:

B.J.Murphy, N.Klusch, J.Langer, D.J.Mills, O.Yildiz, W.Kuhlbrandt. Rotary Substates of Mitochondrial Atp Synthase Reveal the Basis of Flexible F1-Focoupling. Science V. 364 2019.
ISSN: ESSN 1095-9203
PubMed: 31221832
DOI: 10.1126/SCIENCE.AAW9128
Page generated: Tue Oct 29 06:29:59 2024

Last articles

Mg in 9MOI
Mg in 9MOD
Mg in 9MOC
Mg in 9MOB
Mg in 9MOA
Mg in 9MO8
Mg in 9MO9
Mg in 9MO7
Mg in 9MME
Mg in 9MO6
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy