Atomistry » Zinc » PDB 6rdc-6rg3 » 6re9
Atomistry »
  Zinc »
    PDB 6rdc-6rg3 »
      6re9 »

Zinc in PDB 6re9: Cryo-Em Structure of Polytomella F-Atp Synthase, Rotary Substate 2D, Monomer-Masked Refinement

Enzymatic activity of Cryo-Em Structure of Polytomella F-Atp Synthase, Rotary Substate 2D, Monomer-Masked Refinement

All present enzymatic activity of Cryo-Em Structure of Polytomella F-Atp Synthase, Rotary Substate 2D, Monomer-Masked Refinement:
7.1.2.2;

Other elements in 6re9:

The structure of Cryo-Em Structure of Polytomella F-Atp Synthase, Rotary Substate 2D, Monomer-Masked Refinement also contains other interesting chemical elements:

Magnesium (Mg) 5 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Cryo-Em Structure of Polytomella F-Atp Synthase, Rotary Substate 2D, Monomer-Masked Refinement (pdb code 6re9). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cryo-Em Structure of Polytomella F-Atp Synthase, Rotary Substate 2D, Monomer-Masked Refinement, PDB code: 6re9:

Zinc binding site 1 out of 1 in 6re9

Go back to Zinc Binding Sites List in 6re9
Zinc binding site 1 out of 1 in the Cryo-Em Structure of Polytomella F-Atp Synthase, Rotary Substate 2D, Monomer-Masked Refinement


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryo-Em Structure of Polytomella F-Atp Synthase, Rotary Substate 2D, Monomer-Masked Refinement within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Zn600

b:50.0
occ:1.00
 NE2 M:HIS248 2.4 42.5 1.0
NE2 M:HIS252 2.7 45.1 1.0
CE1 M:HIS248 2.8 42.5 1.0
CE1 M:HIS252 3.5 45.1 1.0
CD2 M:HIS248 3.7 42.5 1.0
CD2 M:HIS252 3.9 45.1 1.0
ND1 M:HIS248 4.0 42.5 1.0
OD1 6:ASP102 4.2 41.7 1.0
CD1 6:LEU105 4.4 39.5 1.0
CG M:HIS248 4.5 42.5 1.0
CG 6:ASP102 4.6 41.7 1.0
ND1 M:HIS252 4.7 45.1 1.0
OD2 6:ASP102 4.9 41.7 1.0
CG M:HIS252 4.9 45.1 1.0

Reference:

B.J.Murphy, N.Klusch, J.Langer, D.J.Mills, O.Yildiz, W.Kuhlbrandt. Rotary Substates of Mitochondrial Atp Synthase Reveal the Basis of Flexible F1-Focoupling. Science V. 364 2019.
ISSN: ESSN 1095-9203
PubMed: 31221832
DOI: 10.1126/SCIENCE.AAW9128
Page generated: Tue Oct 29 06:29:12 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy