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Zinc in PDB 6oev: Structure of Human PATCHED1 in Complex with Native Sonic Hedgehog

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of Human PATCHED1 in Complex with Native Sonic Hedgehog (pdb code 6oev). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of Human PATCHED1 in Complex with Native Sonic Hedgehog, PDB code: 6oev:

Zinc binding site 1 out of 1 in 6oev

Go back to Zinc Binding Sites List in 6oev
Zinc binding site 1 out of 1 in the Structure of Human PATCHED1 in Complex with Native Sonic Hedgehog


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Human PATCHED1 in Complex with Native Sonic Hedgehog within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn200

b:0.8
occ:1.00
ND1 C:HIS182 2.8 0.0 1.0
OE1 C:GLU176 3.1 0.4 1.0
CG C:HIS182 3.1 0.5 1.0
CB C:HIS182 3.4 0.8 1.0
CD C:GLU176 3.4 0.9 1.0
CE1 C:HIS182 3.4 0.5 1.0
CD2 C:TYR174 3.7 0.3 1.0
OE2 C:GLU176 3.8 0.0 1.0
CD2 C:HIS182 3.9 0.3 1.0
CE2 C:TYR174 4.0 0.5 1.0
NE2 C:HIS182 4.0 0.3 1.0
CG C:GLU176 4.1 0.8 1.0
CE1 C:HIS140 4.4 0.2 1.0
CB C:GLU176 4.4 0.8 1.0
CA C:HIS182 4.8 0.6 1.0
NE2 C:HIS140 4.9 0.3 1.0
OD1 C:ASP147 4.9 0.2 1.0
CG C:TYR174 4.9 0.7 1.0

Reference:

X.Qi, P.Schmiege, E.Coutavas, J.Wang, X.Li. Structures of Human Patched and Its Complex with Native Palmitoylated Sonic Hedgehog. Nature V. 560 128 2018.
ISSN: ESSN 1476-4687
PubMed: 29995851
DOI: 10.1038/S41586-018-0308-7
Page generated: Tue Oct 29 04:19:41 2024

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