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Zinc in PDB 6nzl: Solution Structure of Pos-1, A Ccch-Type Tandem Zinc Finger Protein From C. Elegans

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of Pos-1, A Ccch-Type Tandem Zinc Finger Protein From C. Elegans (pdb code 6nzl). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of Pos-1, A Ccch-Type Tandem Zinc Finger Protein From C. Elegans, PDB code: 6nzl:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 6nzl

Go back to Zinc Binding Sites List in 6nzl
Zinc binding site 1 out of 2 in the Solution Structure of Pos-1, A Ccch-Type Tandem Zinc Finger Protein From C. Elegans


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of Pos-1, A Ccch-Type Tandem Zinc Finger Protein From C. Elegans within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:34.5
occ:1.00
SG A:CYS119 2.0 25.1 1.0
SG A:CYS113 2.0 53.1 1.0
NE2 A:HIS123 2.0 3.4 1.0
SG A:CYS104 2.0 72.4 1.0
HB2 A:CYS119 2.7 38.3 1.0
CB A:CYS119 2.8 63.0 1.0
CD2 A:HIS123 3.0 2.5 1.0
HB2 A:CYS104 3.0 38.3 1.0
HB3 A:CYS119 3.1 38.3 1.0
CE1 A:HIS123 3.1 3.2 1.0
CB A:CYS104 3.2 11.2 1.0
HD2 A:HIS123 3.2 74.3 1.0
HB2 A:CYS113 3.2 38.3 1.0
CB A:CYS113 3.3 23.3 1.0
HE1 A:HIS123 3.4 13.1 1.0
HB3 A:CYS104 3.6 38.3 1.0
HB2 A:PHE121 3.7 38.3 1.0
HB2 A:TYR107 3.7 38.3 1.0
HB3 A:CYS113 3.7 38.3 1.0
HB2 A:ALA106 4.1 38.3 1.0
CG A:HIS123 4.2 73.2 1.0
ND1 A:HIS123 4.2 71.3 1.0
CA A:CYS119 4.3 21.0 1.0
H A:PHE121 4.4 38.3 1.0
O A:PHE121 4.4 45.1 1.0
H A:TYR107 4.4 38.3 1.0
O A:GLY116 4.4 52.3 1.0
CA A:CYS104 4.5 74.1 1.0
HA A:CYS104 4.5 62.3 1.0
HA A:CYS119 4.5 20.1 1.0
HB3 A:TYR107 4.6 38.3 1.0
CA A:CYS113 4.6 42.0 1.0
HD2 A:PHE121 4.6 32.1 1.0
CB A:TYR107 4.6 70.1 1.0
HA A:CYS113 4.6 74.4 1.0
CB A:PHE121 4.7 71.5 1.0
HB2 A:TYR115 4.8 38.3 1.0
H A:GLY116 4.9 38.3 1.0
C A:PHE121 4.9 32.2 1.0
N A:TYR107 5.0 30.4 1.0
C A:CYS119 5.0 23.3 1.0

Zinc binding site 2 out of 2 in 6nzl

Go back to Zinc Binding Sites List in 6nzl
Zinc binding site 2 out of 2 in the Solution Structure of Pos-1, A Ccch-Type Tandem Zinc Finger Protein From C. Elegans


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of Pos-1, A Ccch-Type Tandem Zinc Finger Protein From C. Elegans within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn202

b:40.5
occ:1.00
NE2 A:HIS166 2.0 70.1 1.0
SG A:CYS162 2.0 23.0 1.0
SG A:CYS156 2.0 54.4 1.0
SG A:CYS147 2.1 2.0 1.0
CD2 A:HIS166 2.7 10.3 1.0
HD2 A:HIS166 2.8 61.2 1.0
HB2 A:CYS156 2.8 38.3 1.0
CB A:CYS156 2.9 65.4 1.0
HB2 A:CYS162 2.9 38.3 1.0
CB A:CYS162 3.0 73.1 1.0
HB3 A:CYS156 3.1 38.3 1.0
CE1 A:HIS166 3.2 41.3 1.0
HB3 A:CYS162 3.3 38.3 1.0
HB2 A:CYS147 3.4 38.3 1.0
CB A:CYS147 3.4 40.1 1.0
HB2 A:PHE164 3.5 38.3 1.0
HE1 A:HIS166 3.6 61.5 1.0
HB2 A:PHE150 3.7 38.3 1.0
HB3 A:CYS147 3.9 38.3 1.0
CG A:HIS166 4.0 61.2 1.0
O A:PHE164 4.0 41.5 1.0
ND1 A:HIS166 4.2 62.4 1.0
HB2 A:TYR158 4.3 38.3 1.0
H A:PHE164 4.3 38.3 1.0
CA A:CYS156 4.3 60.1 1.0
CA A:CYS162 4.4 70.3 1.0
HD2 A:PHE164 4.4 51.1 1.0
HD1 A:TYR158 4.5 44.2 1.0
HA A:CYS162 4.5 75.0 1.0
CB A:PHE164 4.5 21.4 1.0
H A:GLY159 4.6 38.3 1.0
HA A:CYS156 4.6 62.3 1.0
HA A:CYS147 4.7 74.4 1.0
CB A:PHE150 4.7 20.1 1.0
H A:PHE150 4.7 38.3 1.0
CA A:CYS147 4.7 61.4 1.0
HB3 A:PHE150 4.8 38.3 1.0
HB2 A:LYS149 4.8 38.3 1.0
C A:PHE164 4.8 72.3 1.0
O A:GLY159 4.9 20.0 1.0
HB3 A:PHE164 4.9 38.3 1.0

Reference:

A.Ertekin, F.Massi. Solution Structure of Pos-1, A Ccch-Type Tandem Zinc Finger Protein From C. Elegans To Be Published.
Page generated: Tue Oct 29 04:02:01 2024

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