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Zinc in PDB 6m17: The 2019-Ncov Rbd/ACE2-B0AT1 Complex

Enzymatic activity of The 2019-Ncov Rbd/ACE2-B0AT1 Complex

All present enzymatic activity of The 2019-Ncov Rbd/ACE2-B0AT1 Complex:
3.4.17.23;

Zinc Binding Sites:

The binding sites of Zinc atom in the The 2019-Ncov Rbd/ACE2-B0AT1 Complex (pdb code 6m17). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the The 2019-Ncov Rbd/ACE2-B0AT1 Complex, PDB code: 6m17:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 6m17

Go back to Zinc Binding Sites List in 6m17
Zinc binding site 1 out of 2 in the The 2019-Ncov Rbd/ACE2-B0AT1 Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The 2019-Ncov Rbd/ACE2-B0AT1 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn914

b:1.0
occ:1.00
OE2 B:GLU402 2.1 97.9 1.0
NE2 B:HIS374 2.2 0.3 1.0
CE1 B:HIS378 2.3 91.5 1.0
CD B:GLU402 3.0 97.9 1.0
CE1 B:HIS374 3.1 0.3 1.0
OE1 B:GLU402 3.1 97.9 1.0
NE2 B:HIS378 3.1 91.5 1.0
CD2 B:HIS374 3.2 0.3 1.0
OE2 B:GLU375 3.3 97.3 1.0
ND1 B:HIS378 3.4 91.5 1.0
ND1 B:HIS374 4.2 0.3 1.0
CG B:HIS374 4.3 0.3 1.0
CD2 B:HIS378 4.4 91.5 1.0
CG B:GLU402 4.4 97.9 1.0
CG B:HIS378 4.5 91.5 1.0
CD B:GLU375 4.6 97.3 1.0

Zinc binding site 2 out of 2 in 6m17

Go back to Zinc Binding Sites List in 6m17
Zinc binding site 2 out of 2 in the The 2019-Ncov Rbd/ACE2-B0AT1 Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of The 2019-Ncov Rbd/ACE2-B0AT1 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Zn914

b:1.0
occ:1.00
OE2 D:GLU402 2.1 97.9 1.0
NE2 D:HIS374 2.2 0.3 1.0
CE1 D:HIS378 2.3 91.5 1.0
CD D:GLU402 3.0 97.9 1.0
CE1 D:HIS374 3.1 0.3 1.0
OE1 D:GLU402 3.1 97.9 1.0
NE2 D:HIS378 3.1 91.5 1.0
CD2 D:HIS374 3.2 0.3 1.0
OE2 D:GLU375 3.3 97.3 1.0
ND1 D:HIS378 3.4 91.5 1.0
ND1 D:HIS374 4.2 0.3 1.0
CG D:HIS374 4.3 0.3 1.0
CD2 D:HIS378 4.4 91.5 1.0
CG D:GLU402 4.4 97.9 1.0
CG D:HIS378 4.5 91.5 1.0
CD D:GLU375 4.6 97.3 1.0

Reference:

R.H.Yan, Y.Y.Zhang, Y.N.Li, L.Xia, Q.Zhou. Structure of Dimeric Full-Length ACE2 in Complex with B0AT1 To Be Published.
Page generated: Tue Oct 29 02:51:58 2024

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