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Zinc in PDB 6jda: Crystal Structure of N-Acetyl Mannosmaine Kinase in Complex with N- Acetylmannosamine in Pasteurella Multocida

Enzymatic activity of Crystal Structure of N-Acetyl Mannosmaine Kinase in Complex with N- Acetylmannosamine in Pasteurella Multocida

All present enzymatic activity of Crystal Structure of N-Acetyl Mannosmaine Kinase in Complex with N- Acetylmannosamine in Pasteurella Multocida:
2.7.1.60;

Protein crystallography data

The structure of Crystal Structure of N-Acetyl Mannosmaine Kinase in Complex with N- Acetylmannosamine in Pasteurella Multocida, PDB code: 6jda was solved by G.Thanuja, S.Ramaswamy, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.56 / 2.90
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 103.816, 173.732, 48.060, 90.00, 90.00, 90.00
R / Rfree (%) 19.4 / 24.7

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of N-Acetyl Mannosmaine Kinase in Complex with N- Acetylmannosamine in Pasteurella Multocida (pdb code 6jda). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of N-Acetyl Mannosmaine Kinase in Complex with N- Acetylmannosamine in Pasteurella Multocida, PDB code: 6jda:

Zinc binding site 1 out of 1 in 6jda

Go back to Zinc Binding Sites List in 6jda
Zinc binding site 1 out of 1 in the Crystal Structure of N-Acetyl Mannosmaine Kinase in Complex with N- Acetylmannosamine in Pasteurella Multocida


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of N-Acetyl Mannosmaine Kinase in Complex with N- Acetylmannosamine in Pasteurella Multocida within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn302

b:49.7
occ:1.00
 ND1 A:HIS156 2.0 43.7 1.0
SG A:CYS173 2.5 49.5 1.0
SG A:CYS168 2.5 49.1 1.0
SG A:CYS166 2.5 50.9 1.0
CE1 A:HIS156 2.8 47.3 1.0
CB A:CYS166 3.0 41.9 1.0
CG A:HIS156 3.1 46.6 1.0
CB A:CYS173 3.2 46.6 1.0
CB A:CYS168 3.3 48.2 1.0
CB A:HIS156 3.5 48.8 1.0
NE2 A:HIS156 4.0 47.9 1.0
CA A:HIS156 4.0 45.6 1.0
CD2 A:HIS156 4.1 47.3 1.0
N A:CYS168 4.3 50.3 1.0
CA A:CYS168 4.4 48.7 1.0
CA A:CYS166 4.5 44.3 1.0
CA A:CYS173 4.7 46.3 1.0
O A:GLY155 4.7 47.0 1.0
O A:ARG170 4.8 48.6 1.0
CB A:ARG170 4.8 45.6 1.0
N A:HIS156 5.0 46.1 1.0

Reference:

G.Thanuja, S.Ramaswamy. Crystal Structure of N-Acetyl Mannosmaine Kinase in Complex with N-Acetylmannosamine in Pasteurella Multocida To Be Published.
Page generated: Thu Aug 21 16:19:56 2025

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