Zinc in PDB 6ijp: The Structure of the Adal-Imp Complex

The structure of The Structure of the Adal-Imp Complex, PDB code: 6ijp was solved by W.Xie, Q.Jia, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	43.87 / 1.85
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	50.884, 81.288, 86.619, 90.00, 90.00, 90.00
R / Rfree (%)	15.9 / 17.8

The binding sites of Zinc atom in the The Structure of the Adal-Imp Complex (pdb code 6ijp). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the The Structure of the Adal-Imp Complex, PDB code: 6ijp:

Zinc binding site 1 out of 1 in the The Structure of the Adal-Imp Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Structure of the Adal-Imp Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:26.0 occ:0.93 NE2 A:HIS15 2.1 21.5 1.0 OD1 A:ASP295 2.2 20.2 1.0 O A:HOH527 2.2 25.0 1.0 NE2 A:HIS217 2.2 19.6 1.0 NE2 A:HIS13 2.2 21.9 1.0 CD2 A:HIS15 3.1 20.2 1.0 CE1 A:HIS217 3.1 22.9 1.0 CE1 A:HIS13 3.1 24.9 1.0 CG A:ASP295 3.2 25.5 1.0 CE1 A:HIS15 3.2 21.1 1.0 CD2 A:HIS13 3.2 22.6 1.0 CD2 A:HIS217 3.2 20.2 1.0 OD2 A:ASP295 3.5 26.1 1.0 C5 A:IMP402 3.6 27.1 1.0 C6 A:IMP402 3.8 30.9 1.0 NE2 A:HIS240 3.8 53.5 1.0 N7 A:IMP402 3.9 26.4 1.0 C4 A:IMP402 4.1 23.7 1.0 ND1 A:HIS217 4.2 25.1 1.0 O6 A:IMP402 4.2 31.1 1.0 CG A:HIS15 4.2 22.7 1.0 N1 A:IMP402 4.3 25.6 1.0 ND1 A:HIS15 4.3 22.6 1.0 ND1 A:HIS13 4.3 21.6 1.0 CG A:HIS13 4.3 21.4 1.0 CG A:HIS217 4.3 25.3 1.0 C8 A:IMP402 4.4 24.4 1.0 CB A:ASP295 4.5 20.1 1.0 N9 A:IMP402 4.5 25.4 1.0 N3 A:IMP402 4.5 23.9 1.0 C2 A:IMP402 4.6 26.1 1.0 CD2 A:HIS240 4.6 47.8 1.0 CE1 A:HIS240 4.7 50.8 1.0 CA A:ASP295 4.7 20.4 1.0 OD2 A:ASP296 4.7 27.2 1.0 O A:ASP295 5.0 22.8 1.0

Q.Jia, W.Xie. Alternative Conformation Induced By Substrate Binding For Arabidopsis THALIANAN6-Methyl-Amp Deaminase. Nucleic Acids Res. V. 47 3233 2019.
ISSN: ESSN 1362-4962
PubMed: 30721978
DOI: 10.1093/NAR/GKZ070