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Zinc in PDB 6gen: Chromatin Remodeller-Nucleosome Complex at 4.5 A Resolution.

Enzymatic activity of Chromatin Remodeller-Nucleosome Complex at 4.5 A Resolution.

All present enzymatic activity of Chromatin Remodeller-Nucleosome Complex at 4.5 A Resolution.:
3.6.4.12;

Other elements in 6gen:

The structure of Chromatin Remodeller-Nucleosome Complex at 4.5 A Resolution. also contains other interesting chemical elements:

Fluorine (F) 6 atoms
Magnesium (Mg) 8 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Chromatin Remodeller-Nucleosome Complex at 4.5 A Resolution. (pdb code 6gen). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Chromatin Remodeller-Nucleosome Complex at 4.5 A Resolution., PDB code: 6gen:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 6gen

Go back to Zinc Binding Sites List in 6gen
Zinc binding site 1 out of 2 in the Chromatin Remodeller-Nucleosome Complex at 4.5 A Resolution.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Chromatin Remodeller-Nucleosome Complex at 4.5 A Resolution. within 5.0Å range:
probe atom residue distance (Å) B Occ
S:Zn501

b:1.0
occ:1.00
SG S:CYS264 2.6 90.1 1.0
SG S:CYS244 2.6 74.0 1.0
SG S:CYS268 2.6 85.2 1.0
SG S:CYS247 2.9 61.5 1.0
N S:CYS247 3.0 61.5 1.0
CB S:CYS244 3.4 74.0 1.0
CB S:CYS247 3.5 61.5 1.0
CB S:ILE246 3.6 81.5 1.0
CB S:CYS268 3.6 85.2 1.0
CA S:CYS247 3.7 61.5 1.0
CB S:CYS264 3.7 90.1 1.0
C S:ILE246 4.0 81.5 1.0
N S:GLY248 4.0 67.6 1.0
N S:CYS264 4.1 90.1 1.0
C S:CYS247 4.1 61.5 1.0
CA S:ILE246 4.1 81.5 1.0
N S:ILE246 4.2 81.5 1.0
N S:GLY249 4.3 78.6 1.0
CG1 S:ILE246 4.4 81.5 1.0
CG2 S:ILE246 4.4 81.5 1.0
CA S:CYS264 4.5 90.1 1.0
N S:SER265 4.5 90.0 1.0
CA S:CYS244 4.8 74.0 1.0
CA S:CYS268 5.0 85.2 1.0

Zinc binding site 2 out of 2 in 6gen

Go back to Zinc Binding Sites List in 6gen
Zinc binding site 2 out of 2 in the Chromatin Remodeller-Nucleosome Complex at 4.5 A Resolution.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Chromatin Remodeller-Nucleosome Complex at 4.5 A Resolution. within 5.0Å range:
probe atom residue distance (Å) B Occ
S:Zn502

b:1.0
occ:1.00
SG S:CYS259 2.6 80.9 1.0
SG S:CYS277 2.6 0.6 1.0
SG S:CYS256 2.6 96.1 1.0
NE2 S:HIS272 2.7 99.0 1.0
CD2 S:HIS272 3.2 99.0 1.0
CB S:CYS256 3.6 96.1 1.0
CB S:CYS277 3.8 0.6 1.0
CE1 S:HIS272 3.9 99.0 1.0
CB S:CYS259 4.0 80.9 1.0
N S:CYS259 4.2 80.9 1.0
CG S:HIS272 4.5 99.0 1.0
CA S:CYS277 4.6 0.6 1.0
N S:ASN258 4.6 96.2 1.0
CA S:CYS259 4.7 80.9 1.0
N S:VAL257 4.8 91.8 1.0
CB S:ASN258 4.8 96.2 1.0
ND1 S:HIS272 4.8 99.0 1.0

Reference:

O.Willhoft, M.Ghoneim, C.L.Lin, E.Y.D.Chua, M.Wilkinson, Y.Chaban, R.Ayala, E.A.Mccormack, L.Ocloo, D.S.Rueda, D.B.Wigley. Structure and Dynamics of the Yeast SWR1-Nucleosome Complex. Science V. 362 2018.
ISSN: ESSN 1095-9203
PubMed: 30309918
DOI: 10.1126/SCIENCE.AAT7716
Page generated: Mon Oct 28 21:48:09 2024

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