Zinc in PDB 6c4x: Cross-Alpha Amyloid-Like Structure Alphaammem

The structure of Cross-Alpha Amyloid-Like Structure Alphaammem, PDB code: 6c4x was solved by L.Liu, S.Q.Zhang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	71.60 / 3.55
Space group	P 61 2 2
Cell size a, b, c (Å), α, β, γ (°)	82.676, 82.676, 155.009, 90.00, 90.00, 120.00
R / Rfree (%)	30.7 / 34.5

The binding sites of Zinc atom in the Cross-Alpha Amyloid-Like Structure Alphaammem (pdb code 6c4x). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cross-Alpha Amyloid-Like Structure Alphaammem, PDB code: 6c4x:

Zinc binding site 1 out of 1 in the Cross-Alpha Amyloid-Like Structure Alphaammem


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cross-Alpha Amyloid-Like Structure Alphaammem within 5.0Å range: probe atom residue distance (Å) B Occ H:Zn101 b:0.5 occ:0.50 ND1 H:HIS15 2.3 0.8 1.0 CE1 H:HIS15 2.8 0.1 1.0 CG H:HIS15 3.1 0.3 1.0 NE2 H:HIS15 3.6 0.7 1.0 CB H:HIS15 3.7 0.5 1.0 CD2 H:HIS15 3.8 0.3 1.0

S.Q.Zhang, H.Huang, J.Yang, H.T.Kratochvil, M.Lolicato, Y.Liu, X.Shu, L.Liu, W.F.Degrado. Designed Peptides That Assemble Into Cross-Alpha Amyloid-Like Structures. Nat. Chem. Biol. V. 14 870 2018.
ISSN: ESSN 1552-4469
PubMed: 30061717
DOI: 10.1038/S41589-018-0105-5