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Zinc in PDB 5ion: Solution Structure of Miz-1 Zinc Finger 13

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of Miz-1 Zinc Finger 13 (pdb code 5ion). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Solution Structure of Miz-1 Zinc Finger 13, PDB code: 5ion:

Zinc binding site 1 out of 1 in 5ion

Go back to Zinc Binding Sites List in 5ion
Zinc binding site 1 out of 1 in the Solution Structure of Miz-1 Zinc Finger 13


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of Miz-1 Zinc Finger 13 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn101

b:0.3
occ:1.00
NE2 A:HIS26 2.0 0.4 1.0
OD2 A:ASP11 2.0 1.2 1.0
NE2 A:HIS22 2.2 0.2 1.0
SG A:CYS9 2.3 0.7 1.0
SG A:CYS6 2.3 0.4 1.0
CE1 A:HIS26 2.9 0.4 1.0
CD2 A:HIS26 3.0 0.3 1.0
CD2 A:HIS22 3.0 0.2 1.0
HD2 A:HIS22 3.1 0.2 1.0
HB3 A:CYS6 3.1 0.2 1.0
HE1 A:HIS26 3.1 0.4 1.0
CG A:ASP11 3.1 0.8 1.0
HB2 A:CYS9 3.2 0.9 1.0
HD2 A:HIS26 3.3 0.4 1.0
CE1 A:HIS22 3.3 0.2 1.0
CB A:CYS6 3.3 0.2 1.0
CB A:CYS9 3.4 0.4 1.0
HE1 A:HIS22 3.7 0.2 1.0
OD1 A:ASP11 3.8 0.8 1.0
HB3 A:CYS9 3.9 0.8 1.0
HB2 A:CYS6 3.9 0.2 1.0
HB2 A:ASP11 3.9 0.6 1.0
ND1 A:HIS26 4.0 0.3 1.0
CG A:HIS26 4.0 0.3 1.0
H A:CYS9 4.2 0.4 1.0
CB A:ASP11 4.2 0.3 1.0
CG A:HIS22 4.2 0.1 1.0
O A:CYS6 4.3 0.2 1.0
H A:ASP11 4.3 0.3 1.0
ND1 A:HIS22 4.4 0.2 1.0
CA A:CYS6 4.6 0.2 1.0
O A:ASP7 4.6 0.5 1.0
C A:CYS6 4.6 0.2 1.0
CA A:CYS9 4.6 0.4 1.0
HE2 A:PHE13 4.6 0.5 1.0
HA A:VAL23 4.7 0.2 1.0
N A:CYS9 4.8 0.4 1.0
HB3 A:ASP11 4.8 0.4 1.0
H A:GLY10 4.8 0.3 1.0
HG11 A:VAL23 4.8 1.0 1.0
HD1 A:HIS26 4.8 0.4 1.0

Reference:

C.Tremblay, M.Bedard, M.A.Bonin, P.Lavigne. Solution Structure of the 13TH C2H2 Zinc Finger of Miz-1. Biochem.Biophys.Res.Commun. V. 473 471 2016.
ISSN: ESSN 1090-2104
PubMed: 26972249
DOI: 10.1016/J.BBRC.2016.03.034
Page generated: Sun Oct 27 18:17:19 2024

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