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Zinc in PDB 5cyz: Structure of S. Cerevisiae HRR25:MAM1 Complex, Form 1

Enzymatic activity of Structure of S. Cerevisiae HRR25:MAM1 Complex, Form 1

All present enzymatic activity of Structure of S. Cerevisiae HRR25:MAM1 Complex, Form 1:
2.7.11.1;

Protein crystallography data

The structure of Structure of S. Cerevisiae HRR25:MAM1 Complex, Form 1, PDB code: 5cyz was solved by Q.Ye, K.D.Corbett, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.20 / 1.84
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 54.190, 83.986, 67.424, 90.00, 108.53, 90.00
R / Rfree (%) 16.3 / 19.2

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of S. Cerevisiae HRR25:MAM1 Complex, Form 1 (pdb code 5cyz). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of S. Cerevisiae HRR25:MAM1 Complex, Form 1, PDB code: 5cyz:

Zinc binding site 1 out of 1 in 5cyz

Go back to Zinc Binding Sites List in 5cyz
Zinc binding site 1 out of 1 in the Structure of S. Cerevisiae HRR25:MAM1 Complex, Form 1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of S. Cerevisiae HRR25:MAM1 Complex, Form 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn201

b:28.6
occ:1.00
ND1 C:HIS116 2.1 28.0 1.0
SG C:CYS152 2.3 33.1 1.0
SG C:CYS114 2.4 31.7 1.0
SG C:CYS119 2.4 30.1 1.0
CE1 C:HIS116 3.0 32.5 1.0
CG C:HIS116 3.0 38.1 1.0
CB C:CYS114 3.2 34.1 1.0
CB C:CYS152 3.2 24.0 1.0
CB C:CYS119 3.3 29.8 1.0
CB C:HIS116 3.4 32.0 1.0
CD2 C:LEU148 4.0 22.7 1.0
NE2 C:HIS116 4.1 40.7 1.0
CD2 C:HIS116 4.1 38.8 1.0
N C:HIS116 4.4 33.3 1.0
CA C:HIS116 4.5 29.7 1.0
CA C:CYS114 4.6 36.2 1.0
CA C:CYS152 4.7 23.3 1.0
CA C:CYS119 4.7 27.8 1.0
CG2 C:ILE112 4.9 30.2 1.0
O C:HOH355 5.0 52.7 1.0

Reference:

Q.Ye, S.N.Ur, T.Y.Su, K.D.Corbett. Structure of the Saccharomyces Cerevisiae HRR25:MAM1 Monopolin Subcomplex Reveals A Novel Kinase Regulator. Embo J. V. 35 2139 2016.
ISSN: ISSN 0261-4189
PubMed: 27491543
DOI: 10.15252/EMBJ.201694082
Page generated: Sun Oct 27 14:30:42 2024

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