Zinc in PDB 4o6o: Structural and Functional Studies the Characterization of CYS4 Zinc- Finger Motif in the Recombination Mediator Protein Recr

The structure of Structural and Functional Studies the Characterization of CYS4 Zinc- Finger Motif in the Recombination Mediator Protein Recr, PDB code: 4o6o was solved by Q.Tang, Y.P.Liu, X.X.Yan, D.C.Liang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 3.00
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	90.604, 67.912, 94.364, 90.00, 92.98, 90.00
R / Rfree (%)	22 / 25.5

The binding sites of Zinc atom in the Structural and Functional Studies the Characterization of CYS4 Zinc- Finger Motif in the Recombination Mediator Protein Recr (pdb code 4o6o). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 4 binding sites of Zinc where determined in the Structural and Functional Studies the Characterization of CYS4 Zinc- Finger Motif in the Recombination Mediator Protein Recr, PDB code: 4o6o:
Jump to Zinc binding site number: 1; 2; 3; 4;

Zinc binding site 1 out of 4 in the Structural and Functional Studies the Characterization of CYS4 Zinc- Finger Motif in the Recombination Mediator Protein Recr


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structural and Functional Studies the Characterization of CYS4 Zinc- Finger Motif in the Recombination Mediator Protein Recr within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:59.2 occ:1.00 SG A:CYS70 2.0 65.1 1.0 O A:HOH301 2.3 23.4 1.0 SG A:CYS58 2.4 57.7 1.0 CB A:CYS67 2.7 67.3 1.0 CB A:CYS58 3.1 54.0 1.0 N A:CYS58 3.4 54.5 1.0 N A:CYS67 3.5 69.7 1.0 CB A:CYS70 3.5 61.5 1.0 CA A:CYS67 3.7 69.5 1.0 CA A:CYS58 3.8 53.6 1.0 SG A:CYS67 3.9 69.2 1.0 CB A:ILE57 4.2 55.3 1.0 CG2 A:ILE57 4.3 55.4 1.0 N A:CYS70 4.4 63.9 1.0 C A:ILE57 4.4 55.0 1.0 CA A:CYS70 4.6 62.4 1.0 C A:CYS67 4.6 72.3 1.0 O A:CYS67 4.6 71.9 1.0 C A:VAL66 4.6 70.4 1.0 C A:CYS58 4.6 52.4 1.0 CA A:ILE57 4.7 55.5 1.0 N A:PHE59 4.7 52.3 1.0 N A:ILE57 4.8 56.4 1.0 CB A:ASN60 5.0 58.9 1.0

Zinc binding site 2 out of 4 in the Structural and Functional Studies the Characterization of CYS4 Zinc- Finger Motif in the Recombination Mediator Protein Recr


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structural and Functional Studies the Characterization of CYS4 Zinc- Finger Motif in the Recombination Mediator Protein Recr within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn201 b:54.7 occ:1.00 SG B:CYS58 1.9 64.9 1.0 SG B:CYS67 2.4 70.0 1.0 O B:HOH301 2.5 6.8 1.0 SG B:CYS70 2.6 71.9 1.0 CB B:CYS58 3.0 62.1 1.0 CB B:CYS70 3.2 71.6 1.0 CB B:CYS67 3.3 72.7 1.0 N B:CYS58 3.6 60.2 1.0 CA B:CYS58 3.9 61.7 1.0 N B:CYS67 4.0 73.8 1.0 CA B:CYS67 4.2 73.3 1.0 N B:CYS70 4.3 67.9 1.0 CA B:CYS70 4.4 71.5 1.0 C B:CYS58 4.6 61.8 1.0 CB B:ILE57 4.6 56.7 1.0 CB B:ASN60 4.6 87.0 1.0 C B:ILE57 4.7 58.4 1.0 N B:ILE57 4.7 55.3 1.0 O B:CYS67 4.7 74.1 1.0 CA B:GLY55 4.7 60.6 1.0 CG1 B:ILE57 4.8 56.8 1.0 C B:CYS67 4.8 73.6 1.0 CA B:ILE57 4.9 56.7 1.0 N B:PHE59 5.0 63.9 1.0

Zinc binding site 3 out of 4 in the Structural and Functional Studies the Characterization of CYS4 Zinc- Finger Motif in the Recombination Mediator Protein Recr


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Structural and Functional Studies the Characterization of CYS4 Zinc- Finger Motif in the Recombination Mediator Protein Recr within 5.0Å range: probe atom residue distance (Å) B Occ C:Zn201 b:75.2 occ:1.00 SG C:CYS67 2.0 69.4 1.0 CB C:CYS67 2.1 76.2 1.0 SG C:CYS58 2.3 66.3 1.0 O C:HOH312 2.4 46.6 1.0 SG C:CYS70 3.1 65.2 1.0 CB C:CYS58 3.1 65.5 1.0 CB C:CYS70 3.3 63.4 1.0 N C:CYS58 3.3 65.9 1.0 CA C:CYS67 3.5 78.0 1.0 N C:CYS67 3.6 79.2 1.0 CA C:CYS58 3.8 65.4 1.0 CB C:ILE57 4.3 63.5 1.0 N C:CYS70 4.4 65.0 1.0 C C:ILE57 4.4 65.8 1.0 C C:CYS67 4.4 79.7 1.0 CA C:CYS70 4.4 64.6 1.0 C C:CYS58 4.4 64.5 1.0 CB C:ASN60 4.5 73.5 1.0 O C:CYS67 4.5 80.3 1.0 N C:PHE59 4.6 65.3 1.0 CA C:ILE57 4.7 64.5 1.0 N C:ILE57 4.7 64.7 1.0 CG2 C:ILE57 4.8 62.8 1.0 N C:ASN60 4.8 71.1 1.0 C C:VAL66 4.8 79.5 1.0 CA C:GLY55 4.9 59.9 1.0

Zinc binding site 4 out of 4 in the Structural and Functional Studies the Characterization of CYS4 Zinc- Finger Motif in the Recombination Mediator Protein Recr


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 4 of Structural and Functional Studies the Characterization of CYS4 Zinc- Finger Motif in the Recombination Mediator Protein Recr within 5.0Å range: probe atom residue distance (Å) B Occ D:Zn201 b:66.7 occ:1.00 SG D:CYS58 2.0 54.0 1.0 SG D:CYS67 2.2 67.5 1.0 O D:HOH301 2.4 15.1 1.0 SG D:CYS70 2.5 58.3 1.0 CB D:CYS58 2.8 58.8 1.0 CB D:CYS67 2.9 69.9 1.0 CB D:CYS70 3.5 63.8 1.0 N D:CYS58 3.7 63.1 1.0 CA D:CYS58 3.8 59.6 1.0 N D:CYS67 4.0 69.7 1.0 CA D:CYS67 4.0 70.5 1.0 C D:CYS58 4.2 59.5 1.0 CB D:ASN60 4.4 67.1 1.0 N D:CYS70 4.5 67.1 1.0 N D:ASN60 4.6 65.1 1.0 N D:PHE59 4.6 60.3 1.0 CA D:CYS70 4.6 64.7 1.0 O D:CYS58 4.7 58.6 1.0 O D:CYS67 4.7 73.0 1.0 C D:CYS67 4.7 72.5 1.0 CA D:GLY55 4.8 63.8 1.0 N D:ILE57 4.8 65.0 1.0 C D:ILE57 4.8 66.5 1.0 CB D:ILE57 4.9 67.1 1.0

Q.Tang, Y.P.Liu, X.X.Yan, D.C.Liang. Structural and Functional Characterization of CYS4 Zinc Finger Motif in the Recombination Mediator Protein Recr Dna Repair V. 24 10 2014.
ISSN: ISSN 1568-7864
DOI: 10.1016/J.DNAREP.2014.09.012