Zinc in PDB 4o2i: The Crystal Structure of Non-Lee Encoded Type III Effector C From Citrobacter Rodentium

The structure of The Crystal Structure of Non-Lee Encoded Type III Effector C From Citrobacter Rodentium, PDB code: 4o2i was solved by C.Chang, X.Xu, H.Cui, A.Savchenko, J.Adkins, A.Joachimiak, Midwest Centerfor Structural Genomics (Mcsg), Program For The Characterization Ofsecreted Effector Proteins (Pcsep), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	102.71 / 2.20
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	73.937, 89.356, 205.416, 90.00, 90.00, 90.00
R / Rfree (%)	16.8 / 23.7

The binding sites of Zinc atom in the The Crystal Structure of Non-Lee Encoded Type III Effector C From Citrobacter Rodentium (pdb code 4o2i). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the The Crystal Structure of Non-Lee Encoded Type III Effector C From Citrobacter Rodentium, PDB code: 4o2i:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the The Crystal Structure of Non-Lee Encoded Type III Effector C From Citrobacter Rodentium


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Crystal Structure of Non-Lee Encoded Type III Effector C From Citrobacter Rodentium within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:44.9 occ:1.00 O A:HOH561 1.9 44.4 1.0 NE2 A:HIS187 2.0 39.6 1.0 OD2 A:ASP194 2.0 41.8 1.0 NE2 A:HIS183 2.0 36.6 1.0 CG A:ASP194 2.7 45.8 1.0 OD1 A:ASP194 2.7 39.8 1.0 OH A:TYR227 2.9 66.4 1.0 CE1 A:HIS187 3.0 40.9 1.0 CE1 A:HIS183 3.0 36.7 1.0 CD2 A:HIS187 3.0 36.2 1.0 CD2 A:HIS183 3.0 33.8 1.0 CZ A:TYR227 3.8 55.7 1.0 OE1 A:GLU184 4.1 50.6 1.0 ND1 A:HIS187 4.1 41.5 1.0 ND1 A:HIS183 4.1 36.6 1.0 CB A:ASP194 4.2 43.5 1.0 CG A:HIS187 4.2 37.8 1.0 CG A:HIS183 4.2 34.2 1.0 CE1 A:TYR227 4.3 50.4 1.0 OE2 A:GLU184 4.4 48.7 1.0 CG2 A:THR206 4.5 35.5 1.0 CD A:GLU184 4.6 43.8 1.0 O A:HOH582 4.6 46.6 1.0 CE2 A:TYR227 4.7 48.8 1.0 O A:HOH544 4.7 44.1 1.0 CB A:THR206 4.8 38.0 1.0

Zinc binding site 2 out of 2 in the The Crystal Structure of Non-Lee Encoded Type III Effector C From Citrobacter Rodentium


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of The Crystal Structure of Non-Lee Encoded Type III Effector C From Citrobacter Rodentium within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn401 b:0.6 occ:1.00 NE2 B:HIS183 2.2 78.1 1.0 OD2 B:ASP194 2.4 0.4 1.0 NE2 B:HIS187 2.4 0.6 1.0 O B:HOH525 2.5 70.0 1.0 OD1 B:ASP194 2.8 0.4 1.0 CG B:ASP194 2.9 0.3 1.0 CE1 B:HIS183 3.1 72.5 1.0 CD2 B:HIS183 3.2 72.8 1.0 CE1 B:HIS187 3.4 0.2 1.0 CD2 B:HIS187 3.4 91.8 1.0 OE2 B:GLU184 4.0 84.4 1.0 ND1 B:HIS183 4.2 68.1 1.0 CG B:HIS183 4.4 70.6 1.0 CB B:ASP194 4.4 0.8 1.0 OG1 B:THR206 4.5 0.3 1.0 ND1 B:HIS187 4.5 95.1 1.0 CG B:HIS187 4.6 85.7 1.0 CD B:GLU184 4.7 73.5 1.0 OE1 B:GLU184 4.8 78.2 1.0

C.Chang, X.Xu, H.Cui, A.Savchenko, J.Adkins, A.Joachimiak. The Crystal Structure of Non-Lee Encoded Type III Effector C From Citrobacter Rodentium To Be Published.