Atomistry » Zinc » PDB 4kyh-4l5z » 4l10
Atomistry »
  Zinc »
    PDB 4kyh-4l5z »
      4l10 »

Zinc in PDB 4l10: Tankyrase 2 in Complex with 4'-Methoxy Flavone

Enzymatic activity of Tankyrase 2 in Complex with 4'-Methoxy Flavone

All present enzymatic activity of Tankyrase 2 in Complex with 4'-Methoxy Flavone:
2.4.2.30;

Protein crystallography data

The structure of Tankyrase 2 in Complex with 4'-Methoxy Flavone, PDB code: 4l10 was solved by M.Narwal, T.Haikarainen, L.Lehtio, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.90 / 1.70
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 91.360, 97.810, 118.320, 90.00, 90.00, 90.00
R / Rfree (%) 17.4 / 20.3

Zinc Binding Sites:

The binding sites of Zinc atom in the Tankyrase 2 in Complex with 4'-Methoxy Flavone (pdb code 4l10). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Tankyrase 2 in Complex with 4'-Methoxy Flavone, PDB code: 4l10:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 4l10

Go back to Zinc Binding Sites List in 4l10
Zinc binding site 1 out of 2 in the Tankyrase 2 in Complex with 4'-Methoxy Flavone


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Tankyrase 2 in Complex with 4'-Methoxy Flavone within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1203

b:25.9
occ:1.00
ND1 A:HIS1084 2.2 26.5 1.0
SG A:CYS1081 2.2 24.5 1.0
SG A:CYS1092 2.3 27.7 1.0
SG A:CYS1089 2.3 24.4 1.0
CE1 A:HIS1084 3.1 30.6 1.0
CB A:CYS1081 3.2 25.4 1.0
CG A:HIS1084 3.2 29.9 1.0
CB A:CYS1092 3.2 26.7 1.0
CB A:CYS1089 3.2 23.5 1.0
CB A:HIS1084 3.6 27.8 1.0
N A:HIS1084 3.9 29.4 1.0
N A:CYS1092 4.0 24.9 1.0
O A:HOH1419 4.2 36.5 1.0
CA A:CYS1092 4.2 24.4 1.0
NE2 A:HIS1084 4.2 29.8 1.0
CD2 A:HIS1084 4.3 30.2 1.0
CA A:HIS1084 4.3 28.0 1.0
CB A:VAL1083 4.4 35.0 1.0
CA A:CYS1089 4.6 22.7 1.0
CA A:CYS1081 4.6 25.0 1.0
C A:VAL1083 4.8 33.4 1.0
CB A:ILE1091 4.8 27.9 1.0
N A:VAL1083 4.9 32.4 1.0
O A:HOH1364 4.9 27.0 1.0
CA A:VAL1083 4.9 33.4 1.0
CG1 A:VAL1083 5.0 36.3 1.0

Zinc binding site 2 out of 2 in 4l10

Go back to Zinc Binding Sites List in 4l10
Zinc binding site 2 out of 2 in the Tankyrase 2 in Complex with 4'-Methoxy Flavone


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Tankyrase 2 in Complex with 4'-Methoxy Flavone within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn1203

b:20.6
occ:1.00
ND1 B:HIS1084 2.1 23.6 1.0
SG B:CYS1089 2.3 21.0 1.0
SG B:CYS1081 2.3 18.9 1.0
SG B:CYS1092 2.3 22.4 1.0
CE1 B:HIS1084 3.0 25.5 1.0
CG B:HIS1084 3.1 23.9 1.0
CB B:CYS1092 3.2 21.3 1.0
CB B:CYS1081 3.2 19.7 1.0
CB B:CYS1089 3.3 19.5 1.0
CB B:HIS1084 3.5 22.7 1.0
N B:HIS1084 3.9 24.1 1.0
N B:CYS1092 4.0 20.8 1.0
O B:HOH1344 4.2 29.0 1.0
CA B:CYS1092 4.2 20.3 1.0
NE2 B:HIS1084 4.2 25.5 1.0
CD2 B:HIS1084 4.2 25.6 1.0
CA B:HIS1084 4.3 22.0 1.0
CB B:VAL1083 4.3 26.1 1.0
CA B:CYS1089 4.6 18.8 1.0
CA B:CYS1081 4.7 19.5 1.0
CB B:ILE1091 4.8 21.1 1.0
C B:VAL1083 4.8 24.8 1.0
O B:HOH1333 4.9 21.9 1.0
CG1 B:VAL1083 4.9 27.7 1.0
N B:VAL1083 4.9 24.7 1.0
CA B:VAL1083 4.9 25.5 1.0

Reference:

M.Narwal, J.Koivunen, T.Haikarainen, E.Obaji, O.E.Legala, H.Venkannagari, P.Joensuu, T.Pihlajaniemi, L.Lehtio. Discovery of Tankyrase Inhibiting Flavones with Increased Potency and Isoenzyme Selectivity. J.Med.Chem. V. 56 7880 2013.
ISSN: ISSN 0022-2623
PubMed: 24116873
DOI: 10.1021/JM401463Y
Page generated: Sun Oct 27 01:28:50 2024

Last articles

Mg in 1G8N
Mg in 1G8F
Mg in 1G65
Mg in 1G0U
Mg in 1G7T
Mg in 1G75
Mg in 1G6C
Mg in 1G6H
Mg in 1G69
Mg in 1G67
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy