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Zinc in PDB 4gat: Solution uc(Nmr) Structure of the Wild Type Dna Binding Domain of Area Complexed to A 13BP Dna Containing A Cgata Site, Regularized Mean Structure

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution uc(Nmr) Structure of the Wild Type Dna Binding Domain of Area Complexed to A 13BP Dna Containing A Cgata Site, Regularized Mean Structure (pdb code 4gat). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Solution uc(Nmr) Structure of the Wild Type Dna Binding Domain of Area Complexed to A 13BP Dna Containing A Cgata Site, Regularized Mean Structure, PDB code: 4gat:

Zinc binding site 1 out of 1 in 4gat

Go back to Zinc Binding Sites List in 4gat
Zinc binding site 1 out of 1 in the Solution uc(Nmr) Structure of the Wild Type Dna Binding Domain of Area Complexed to A 13BP Dna Containing A Cgata Site, Regularized Mean Structure


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution uc(Nmr) Structure of the Wild Type Dna Binding Domain of Area Complexed to A 13BP Dna Containing A Cgata Site, Regularized Mean Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn67

b:0.4
occ:1.00
SG A:CYS36 2.3 0.4 1.0
SG A:CYS12 2.3 0.4 1.0
SG A:CYS15 2.3 0.4 1.0
SG A:CYS33 2.3 0.4 1.0
H A:CYS33 2.8 0.3 1.0
HB2 A:CYS36 3.0 0.3 1.0
HB3 A:CYS15 3.1 0.5 1.0
HB3 A:CYS33 3.2 0.4 1.0
CB A:CYS36 3.3 0.3 1.0
CB A:CYS12 3.3 0.4 1.0
CB A:CYS15 3.3 0.5 1.0
CB A:CYS33 3.3 0.4 1.0
H A:CYS15 3.3 0.4 1.0
HB3 A:CYS12 3.4 0.4 1.0
HG23 A:THR17 3.4 1.2 1.0
HB2 A:CYS12 3.5 0.4 1.0
H A:CYS36 3.5 0.3 1.0
N A:CYS33 3.6 0.3 1.0
HG21 A:THR17 3.6 1.3 1.0
HB2 A:ASN14 3.8 0.4 1.0
N A:CYS15 3.9 0.4 1.0
HB3 A:CYS36 4.0 0.4 1.0
CG2 A:THR17 4.0 0.6 1.0
CA A:CYS33 4.1 0.3 1.0
CA A:CYS15 4.2 0.5 1.0
HB2 A:CYS15 4.2 0.5 1.0
H A:THR17 4.2 0.5 1.0
HB2 A:CYS33 4.2 0.4 1.0
N A:CYS36 4.3 0.3 1.0
HE2 A:LYS52 4.3 2.5 1.0
CA A:CYS36 4.4 0.3 1.0
HB A:THR17 4.5 0.8 1.0
HA A:LEU32 4.5 0.3 1.0
HB3 A:LEU32 4.6 0.3 1.0
HE3 A:LYS52 4.6 2.2 1.0
H A:ASN14 4.6 0.4 1.0
CA A:CYS12 4.7 0.4 1.0
CB A:ASN14 4.7 0.4 1.0
HD21 A:LEU32 4.7 1.1 1.0
C A:LEU32 4.8 0.3 1.0
C A:CYS15 4.8 0.5 1.0
HB3 A:ASN14 4.8 0.4 1.0
C A:CYS33 4.8 0.4 1.0
C A:ASN14 4.8 0.5 1.0
CB A:THR17 4.9 0.5 1.0
HA A:CYS36 4.9 0.3 1.0
HG22 A:THR17 4.9 1.1 1.0
H A:PHE16 4.9 0.5 1.0
CE A:LYS52 4.9 2.1 1.0
HA A:CYS12 4.9 0.4 1.0
H A:ASN34 4.9 0.4 1.0
HA A:CYS33 5.0 0.4 1.0
HD3 A:LYS52 5.0 2.3 1.0

Reference:

M.R.Starich, M.Wikstrom, H.N.Arst Jr., G.M.Clore, A.M.Gronenborn. The Solution Structure of A Fungal Area Protein-Dna Complex: An Alternative Binding Mode For the Basic Carboxyl Tail of Gata Factors. J.Mol.Biol. V. 277 605 1998.
ISSN: ISSN 0022-2836
PubMed: 9533883
DOI: 10.1006/JMBI.1998.1625
Page generated: Sat Oct 26 23:12:30 2024

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