Atomistry » Zinc » PDB 4b52-4bj9 » 4bcy
Atomistry »
  Zinc »
    PDB 4b52-4bj9 »
      4bcy »

Zinc in PDB 4bcy: Monomeric Human Cu,Zn Superoxide Dismutase, Mutation H43F

Enzymatic activity of Monomeric Human Cu,Zn Superoxide Dismutase, Mutation H43F

All present enzymatic activity of Monomeric Human Cu,Zn Superoxide Dismutase, Mutation H43F:
1.15.1.1;

Protein crystallography data

The structure of Monomeric Human Cu,Zn Superoxide Dismutase, Mutation H43F, PDB code: 4bcy was solved by W.Awad, K.Saraboji, J.Danielsson, L.Lang, M.Kurnik, S.L.Marklund, M.Oliveberg, D.T.Logan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.19 / 1.27
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 34.870, 47.910, 81.180, 90.00, 90.00, 90.00
R / Rfree (%) 19.1 / 20.3

Other elements in 4bcy:

The structure of Monomeric Human Cu,Zn Superoxide Dismutase, Mutation H43F also contains other interesting chemical elements:

Cadmium (Cd) 6 atoms
Copper (Cu) 2 atoms
Chlorine (Cl) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Monomeric Human Cu,Zn Superoxide Dismutase, Mutation H43F (pdb code 4bcy). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Monomeric Human Cu,Zn Superoxide Dismutase, Mutation H43F, PDB code: 4bcy:

Zinc binding site 1 out of 1 in 4bcy

Go back to Zinc Binding Sites List in 4bcy
Zinc binding site 1 out of 1 in the Monomeric Human Cu,Zn Superoxide Dismutase, Mutation H43F


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Monomeric Human Cu,Zn Superoxide Dismutase, Mutation H43F within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1155

b:18.3
occ:0.87
OD1 A:ASP83 2.0 18.4 1.0
ND1 A:HIS63 2.0 19.1 1.0
ND1 A:HIS71 2.1 18.6 1.0
ND1 A:HIS80 2.1 20.4 1.0
CG A:ASP83 2.7 18.5 1.0
OD2 A:ASP83 2.8 19.5 1.0
CE1 A:HIS80 2.9 19.9 1.0
CE1 A:HIS71 2.9 20.6 1.0
CE1 A:HIS63 3.0 21.5 1.0
CG A:HIS63 3.1 21.0 1.0
CG A:HIS80 3.1 19.0 1.0
CG A:HIS71 3.2 18.3 1.0
CB A:HIS63 3.4 19.8 1.0
CB A:HIS80 3.6 18.5 1.0
CB A:HIS71 3.6 19.8 1.0
O A:LYS136 3.8 20.8 1.0
CA A:HIS71 3.9 19.7 1.0
NE2 A:HIS80 4.1 19.8 1.0
NE2 A:HIS63 4.1 23.1 1.0
NE2 A:HIS71 4.1 19.9 1.0
CB A:ASP83 4.2 19.3 1.0
CD2 A:HIS63 4.2 23.2 1.0
CD2 A:HIS80 4.2 19.4 1.0
CD2 A:HIS71 4.3 20.8 1.0
CA A:ASP83 4.7 19.3 1.0
N A:HIS80 4.7 19.2 1.0
N A:GLY72 4.7 21.6 1.0
CA A:HIS80 4.8 19.1 1.0
C A:LYS136 4.8 20.2 1.0
C A:HIS71 4.9 20.7 1.0
N A:HIS71 4.9 21.6 1.0
N A:ASP83 4.9 17.8 1.0
CA A:HIS63 5.0 19.1 1.0
O A:HOH2024 5.0 24.8 1.0

Reference:

J.Danielsson, W.Awad, K.Saraboji, M.Kurnik, L.Lang, L.Leinartaite, S.L.Marklund, D.T.Logan, M.Oliveberg. Global Structural Motions From the Strain of A Single Hydrogen Bond. Proc.Natl.Acad.Sci.Usa V. 110 3829 2013.
ISSN: ISSN 0027-8424
PubMed: 23431167
DOI: 10.1073/PNAS.1217306110
Page generated: Sat Oct 26 19:39:54 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy