Zinc in PDB 3wwn: Crystal Structure of Lysz From Thermus Thermophilus Complex with Lysw

The structure of Crystal Structure of Lysz From Thermus Thermophilus Complex with Lysw, PDB code: 3wwn was solved by A.Yoshida, T.Tomita, T.Kuzuyama, M.Nishiyama, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.77 / 1.85
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	69.809, 69.809, 148.036, 90.00, 90.00, 90.00
R / Rfree (%)	17.7 / 21.3

The binding sites of Zinc atom in the Crystal Structure of Lysz From Thermus Thermophilus Complex with Lysw (pdb code 3wwn). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Lysz From Thermus Thermophilus Complex with Lysw, PDB code: 3wwn:

Zinc binding site 1 out of 1 in the Crystal Structure of Lysz From Thermus Thermophilus Complex with Lysw


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Lysz From Thermus Thermophilus Complex with Lysw within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn101 b:27.1 occ:1.00 SG B:CYS8 2.3 26.4 1.0 SG B:CYS25 2.3 28.2 1.0 SG B:CYS28 2.3 27.7 1.0 SG B:CYS5 2.4 27.6 1.0 CB B:CYS25 3.1 27.7 1.0 CB B:CYS5 3.1 29.8 1.0 CB B:CYS28 3.3 28.7 1.0 CB B:CYS8 3.3 28.4 1.0 N B:CYS28 3.7 30.0 1.0 N B:CYS8 3.8 30.8 1.0 CA B:CYS28 4.0 28.7 1.0 CA B:CYS8 4.1 30.4 1.0 CB B:GLU7 4.4 34.3 1.0 CA B:CYS25 4.6 28.4 1.0 CA B:CYS5 4.6 30.0 1.0 CB B:ASP27 4.6 39.1 1.0 CB B:ALA10 4.7 33.0 1.0 C B:ASP27 4.7 36.1 1.0 C B:CYS28 4.8 28.1 1.0 C B:GLU7 4.8 32.1 1.0 CB B:ALA30 4.8 28.2 1.0 C B:CYS8 4.8 32.5 1.0 N B:GLY9 4.9 32.0 1.0 N B:GLY29 5.0 27.8 1.0 N B:ALA10 5.0 31.7 1.0

A.Yoshida, T.Tomita, T.Fujimura, C.Nishiyama, T.Kuzuyama, M.Nishiyama. Structural Insight Into Amino Group-Carrier Protein-Mediated Lysine Biosynthesis: Crystal Structure of the Lysz-Lysw Complex From Thermus Thermophilus J.Biol.Chem. 2014.
ISSN: ESSN 1083-351X
DOI: 10.1074/JBC.M114.595983