Zinc in PDB 3v5a: Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Gamma Amino Butyric Acid at 1.44 A Resolution

The structure of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Gamma Amino Butyric Acid at 1.44 A Resolution, PDB code: 3v5a was solved by P.K.Shukla, L.Gautam, M.Sinha, P.Kaur, S.Sharma, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	31.83 / 1.44
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	62.577, 49.933, 65.401, 90.00, 107.30, 90.00
R / Rfree (%)	16.1 / 19.1

The structure of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Gamma Amino Butyric Acid at 1.44 A Resolution also contains other interesting chemical elements:

Iron

(Fe)

1 atom

The binding sites of Zinc atom in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Gamma Amino Butyric Acid at 1.44 A Resolution (pdb code 3v5a). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Gamma Amino Butyric Acid at 1.44 A Resolution, PDB code: 3v5a:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Gamma Amino Butyric Acid at 1.44 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Gamma Amino Butyric Acid at 1.44 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn695 b:15.9 occ:1.00 O A:HOH126 2.0 19.1 1.0 OE1 A:GLU659 2.2 14.4 1.0 OE2 A:GLU659 2.2 17.2 1.0 CD A:GLU659 2.5 17.3 1.0 O A:GLY653 3.8 22.6 1.0 OE2 A:ABU1 4.0 31.0 0.7 CG A:GLU659 4.0 15.4 1.0 O A:ARG654 4.4 17.2 1.0 O A:HOH793 4.5 42.7 1.0 OE1 A:ABU1 4.5 46.4 0.7 CA A:PRO655 4.6 14.5 1.0 CD A:ABU1 4.7 41.3 0.7 N A:THR656 4.7 13.0 1.0 CB A:GLU659 4.8 13.5 1.0 C A:GLY653 4.9 21.8 1.0 C A:ARG654 5.0 17.1 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Gamma Amino Butyric Acid at 1.44 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Gamma Amino Butyric Acid at 1.44 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn696 b:20.8 occ:1.00 O A:HOH792 1.8 37.6 1.0 NE2 A:HIS588 2.1 17.5 1.0 O A:HOH3 2.2 22.6 1.0 O A:HOH798 2.2 41.0 1.0 CE1 A:HIS588 3.0 17.1 1.0 CD2 A:HIS588 3.2 17.5 1.0 O A:HOH727 4.0 32.4 1.0 ND1 A:HIS588 4.2 17.6 1.0 CG A:HIS588 4.3 17.1 1.0 CG2 A:VAL591 4.5 25.2 1.0 O A:HOH102 4.6 20.2 1.0 O A:HOH784 4.7 25.1 1.0

P.K.Shukla, L.Gautam, M.Sinha, P.Kaur, S.Sharma, T.P.Singh. Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Gamma Amino Butyric Acid at 1.44 A Resolution To Be Published.