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Zinc in PDB 3uh2: Tankyrase-1 in Complexed with PJ34

Enzymatic activity of Tankyrase-1 in Complexed with PJ34

All present enzymatic activity of Tankyrase-1 in Complexed with PJ34:
2.4.2.30;

Protein crystallography data

The structure of Tankyrase-1 in Complexed with PJ34, PDB code: 3uh2 was solved by C.A.Kirby, T.Stams, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 62.61 / 2.00
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 125.260, 43.300, 88.540, 90.00, 91.36, 90.00
R / Rfree (%) 17.5 / 21.7

Zinc Binding Sites:

The binding sites of Zinc atom in the Tankyrase-1 in Complexed with PJ34 (pdb code 3uh2). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Tankyrase-1 in Complexed with PJ34, PDB code: 3uh2:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 3uh2

Go back to Zinc Binding Sites List in 3uh2
Zinc binding site 1 out of 2 in the Tankyrase-1 in Complexed with PJ34


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Tankyrase-1 in Complexed with PJ34 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn2001

b:26.0
occ:1.00
ND1 A:HIS1237 2.1 31.1 1.0
SG A:CYS1242 2.3 21.8 1.0
SG A:CYS1234 2.3 24.9 1.0
SG A:CYS1245 2.3 26.1 1.0
CE1 A:HIS1237 3.0 30.8 1.0
CB A:CYS1234 3.2 21.6 1.0
CG A:HIS1237 3.2 29.3 1.0
CB A:CYS1242 3.3 18.5 1.0
CB A:CYS1245 3.3 22.4 1.0
CB A:HIS1237 3.7 26.2 1.0
N A:HIS1237 3.9 24.9 1.0
N A:CYS1245 3.9 24.4 1.0
NE2 A:HIS1237 4.2 31.0 1.0
CA A:CYS1245 4.2 22.7 1.0
CD2 A:HIS1237 4.3 31.1 1.0
CA A:HIS1237 4.4 25.1 1.0
CB A:THR1236 4.6 32.1 1.0
CA A:CYS1234 4.6 22.1 1.0
CA A:CYS1242 4.7 19.0 1.0
CB A:ILE1244 4.8 26.9 1.0
C A:THR1236 4.8 29.9 1.0
O A:HOH36 4.9 21.6 1.0
N A:THR1236 5.0 26.0 1.0

Zinc binding site 2 out of 2 in 3uh2

Go back to Zinc Binding Sites List in 3uh2
Zinc binding site 2 out of 2 in the Tankyrase-1 in Complexed with PJ34


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Tankyrase-1 in Complexed with PJ34 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn2001

b:28.8
occ:1.00
ND1 B:HIS1237 2.1 32.9 1.0
SG B:CYS1242 2.2 26.1 1.0
SG B:CYS1234 2.3 25.5 1.0
SG B:CYS1245 2.3 28.6 1.0
CE1 B:HIS1237 3.1 31.8 1.0
CB B:CYS1234 3.2 22.5 1.0
CG B:HIS1237 3.2 31.5 1.0
CB B:CYS1245 3.2 24.4 1.0
CB B:CYS1242 3.3 22.0 1.0
CB B:HIS1237 3.5 28.8 1.0
N B:HIS1237 3.7 29.0 1.0
N B:CYS1245 4.0 22.4 1.0
O B:HOH95 4.2 25.0 1.0
CA B:HIS1237 4.2 28.3 1.0
CA B:CYS1245 4.2 23.2 1.0
NE2 B:HIS1237 4.2 31.9 1.0
CD2 B:HIS1237 4.3 31.9 1.0
O B:HOH66 4.3 41.4 1.0
CB B:THR1236 4.6 36.5 1.0
CA B:CYS1234 4.6 23.9 1.0
CB B:ILE1244 4.7 21.8 1.0
CA B:CYS1242 4.7 22.1 1.0
C B:THR1236 4.7 36.3 1.0
CA B:THR1236 4.9 31.4 1.0
N B:THR1236 4.9 31.7 1.0
C B:ILE1244 5.0 23.4 1.0

Reference:

C.A.Kirby, A.Cheung, A.Fazal, M.D.Shultz, T.Stams. Structure of Human Tankyrase 1 in Complex with Small-Molecule Inhibitors PJ34 and XAV939. Acta Crystallogr.,Sect.F V. 68 115 2012.
ISSN: ESSN 1744-3091
PubMed: 22297980
DOI: 10.1107/S1744309111051219
Page generated: Sat Oct 26 17:19:48 2024

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