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Zinc in PDB 3u72: Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Isoniazid at 2.2 A Resolution

Protein crystallography data

The structure of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Isoniazid at 2.2 A Resolution, PDB code: 3u72 was solved by P.K.Shukla, L.Gautam, M.Sinha, P.Kaur, S.Sharma, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.94 / 2.20
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 62.400, 49.890, 65.200, 90.00, 107.14, 90.00
R / Rfree (%) 19.4 / 23

Other elements in 3u72:

The structure of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Isoniazid at 2.2 A Resolution also contains other interesting chemical elements:

Iron (Fe) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Isoniazid at 2.2 A Resolution (pdb code 3u72). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Isoniazid at 2.2 A Resolution, PDB code: 3u72:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 3u72

Go back to Zinc Binding Sites List in 3u72
Zinc binding site 1 out of 2 in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Isoniazid at 2.2 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Isoniazid at 2.2 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn695

b:48.2
occ:1.00
OE2 A:GLU659 2.4 30.2 1.0
OE1 A:GLU659 2.5 24.4 1.0
CD A:GLU659 2.7 24.7 1.0
O A:HOH33 3.5 51.0 1.0
O A:GLY653 3.8 29.3 1.0
CG A:GLU659 4.2 24.3 1.0
O A:ARG654 4.4 29.1 1.0
CA A:PRO655 4.5 22.9 1.0
N A:THR656 4.8 16.5 1.0
C A:ARG654 4.9 29.8 1.0
CB A:GLU659 4.9 22.0 1.0
N A:PRO655 5.0 26.0 1.0

Zinc binding site 2 out of 2 in 3u72

Go back to Zinc Binding Sites List in 3u72
Zinc binding site 2 out of 2 in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Isoniazid at 2.2 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Isoniazid at 2.2 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn696

b:27.9
occ:1.00
NE2 A:HIS588 2.0 22.9 1.0
O A:HOH29 2.1 12.7 1.0
O A:HOH3 2.7 34.8 1.0
CE1 A:HIS588 2.8 23.6 1.0
O A:HOH2 2.9 60.3 1.0
CD2 A:HIS588 3.2 24.1 1.0
O A:HOH201 3.9 32.5 1.0
ND1 A:HIS588 4.0 26.0 1.0
CG2 A:VAL591 4.2 23.5 1.0
CG A:HIS588 4.2 23.2 1.0
O A:HOH40 4.6 25.0 1.0

Reference:

P.K.Shukla, L.Gautam, M.Sinha, P.Kaur, S.Sharma, T.P.Singh. Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Isoniazid at 2.2 A Resolution To Be Published.
Page generated: Sat Oct 26 17:02:05 2024

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