Zinc in PDB 3szq: Structure of An S. Pombe Aptx/Dna/Amp/Zn Complex

The structure of Structure of An S. Pombe Aptx/Dna/Amp/Zn Complex, PDB code: 3szq was solved by P.Tumbale, J.Krahn, R.S.Williams, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	24.83 / 2.35
Space group	I 4 3 2
Cell size a, b, c (Å), α, β, γ (°)	157.050, 157.050, 157.050, 90.00, 90.00, 90.00
R / Rfree (%)	16.5 / 21.1

The binding sites of Zinc atom in the Structure of An S. Pombe Aptx/Dna/Amp/Zn Complex (pdb code 3szq). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of An S. Pombe Aptx/Dna/Amp/Zn Complex, PDB code: 3szq:

Zinc binding site 1 out of 1 in the Structure of An S. Pombe Aptx/Dna/Amp/Zn Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of An S. Pombe Aptx/Dna/Amp/Zn Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn4 b:41.6 occ:1.00 OE2 A:GLU221 2.0 31.9 1.0 NE2 A:HIS217 2.2 31.6 1.0 SG A:CYS200 2.3 25.3 1.0 SG A:CYS203 2.6 35.7 1.0 CD A:GLU221 2.9 33.3 1.0 CD2 A:HIS217 3.0 28.0 1.0 CB A:CYS200 3.1 24.9 1.0 CG A:GLU221 3.2 22.8 1.0 CB A:CYS203 3.2 26.9 1.0 CE1 A:HIS217 3.3 35.7 1.0 N A:CYS203 3.7 28.6 1.0 CA A:CYS203 4.0 27.6 1.0 OE1 A:GLU221 4.1 35.2 1.0 CG A:HIS217 4.2 34.0 1.0 ND1 A:HIS217 4.3 33.6 1.0 CA A:CYS200 4.6 26.3 1.0 CB A:ARG202 4.6 21.6 1.0 CB A:GLU221 4.7 22.0 1.0 C A:ARG202 4.7 39.4 1.0 C A:CYS203 4.7 36.1 1.0 N A:GLY204 4.8 35.2 1.0 CB A:GLU205 4.8 35.4 1.0 O A:HOH311 4.9 36.7 1.0 O A:HOH399 4.9 47.2 1.0 N A:ARG202 5.0 26.0 1.0 CA A:ARG202 5.0 26.8 1.0

P.Tumbale, C.D.Appel, R.Kraehenbuehl, P.D.Robertson, J.S.Williams, J.Krahn, I.Ahel, R.S.Williams. Structure of An Aprataxin-Dna Complex with Insights Into AOA1 Neurodegenerative Disease. Nat.Struct.Mol.Biol. V. 18 1189 2011.
ISSN: ISSN 1545-9993
PubMed: 21984210
DOI: 10.1038/NSMB.2146