Zinc in PDB 3st7: Crystal Structure of Capsular Polysaccharide Assembling Protein Capf From Staphylococcus Aureus

The structure of Crystal Structure of Capsular Polysaccharide Assembling Protein Capf From Staphylococcus Aureus, PDB code: 3st7 was solved by T.Miyafusa, Y.Tanaka, M.Kuroda, M.Yao, M.Watanabe, T.Ohta, I.Tanaka, J.M.M.Caaveiro, K.Tsumoto, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	103.52 / 2.45
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	119.530, 119.530, 129.450, 90.00, 90.00, 120.00
R / Rfree (%)	19.2 / 21.4

The binding sites of Zinc atom in the Crystal Structure of Capsular Polysaccharide Assembling Protein Capf From Staphylococcus Aureus (pdb code 3st7). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Capsular Polysaccharide Assembling Protein Capf From Staphylococcus Aureus, PDB code: 3st7:

Zinc binding site 1 out of 1 in the Crystal Structure of Capsular Polysaccharide Assembling Protein Capf From Staphylococcus Aureus


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Capsular Polysaccharide Assembling Protein Capf From Staphylococcus Aureus within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn400 b:64.9 occ:1.00 OE1 A:GLU295 2.0 55.1 1.0 NE2 A:HIS290 2.2 51.3 1.0 NE2 A:HIS337 2.2 58.5 1.0 CD A:GLU295 2.7 58.9 1.0 OE2 A:GLU295 2.8 65.6 1.0 NE2 A:HIS288 2.9 67.6 1.0 CE1 A:HIS290 3.0 49.4 1.0 CE1 A:HIS337 3.1 57.8 1.0 CD2 A:HIS337 3.3 57.0 1.0 CD2 A:HIS290 3.3 50.4 1.0 CD2 A:HIS288 3.4 67.1 1.0 CE1 A:HIS288 4.0 68.4 1.0 CG A:GLU295 4.2 54.5 1.0 ND1 A:HIS290 4.2 51.1 1.0 ND1 A:HIS337 4.2 58.0 1.0 CG A:HIS290 4.4 51.9 1.0 CG A:HIS337 4.4 58.3 1.0 CG2 A:ILE331 4.6 53.8 1.0 CG A:HIS288 4.7 64.3 1.0 CZ A:PHE297 4.7 56.6 1.0 ND1 A:HIS288 5.0 67.2 1.0

T.Miyafusa, J.M.Caaveiro, Y.Tanaka, K.Tsumoto. Crystal Structure of the Enzyme Capf of Staphylococcus Aureus Reveals A Unique Architecture Composed of Two Functional Domains. Biochem.J. V. 443 671 2012.
ISSN: ISSN 0264-6021
PubMed: 22320426
DOI: 10.1042/BJ20112049