Atomistry » Zinc » PDB 3sck-3sjd » 3sco
Atomistry »
  Zinc »
    PDB 3sck-3sjd »
      3sco »

Zinc in PDB 3sco: Crystal Structure of Rice BGLU1 E386G Mutant Complexed with Alpha- Glucosyl Fluoride

Enzymatic activity of Crystal Structure of Rice BGLU1 E386G Mutant Complexed with Alpha- Glucosyl Fluoride

All present enzymatic activity of Crystal Structure of Rice BGLU1 E386G Mutant Complexed with Alpha- Glucosyl Fluoride:
3.2.1.21;

Protein crystallography data

The structure of Crystal Structure of Rice BGLU1 E386G Mutant Complexed with Alpha- Glucosyl Fluoride, PDB code: 3sco was solved by S.Pengthaisong, S.G.Withers, B.Kuaprasert, J.R.Ketudat Cairns, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.06 / 1.95
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 79.852, 100.806, 127.114, 90.00, 90.00, 90.00
R / Rfree (%) 17.2 / 20.7

Other elements in 3sco:

The structure of Crystal Structure of Rice BGLU1 E386G Mutant Complexed with Alpha- Glucosyl Fluoride also contains other interesting chemical elements:

Fluorine (F) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Rice BGLU1 E386G Mutant Complexed with Alpha- Glucosyl Fluoride (pdb code 3sco). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Rice BGLU1 E386G Mutant Complexed with Alpha- Glucosyl Fluoride, PDB code: 3sco:

Zinc binding site 1 out of 1 in 3sco

Go back to Zinc Binding Sites List in 3sco
Zinc binding site 1 out of 1 in the Crystal Structure of Rice BGLU1 E386G Mutant Complexed with Alpha- Glucosyl Fluoride


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Rice BGLU1 E386G Mutant Complexed with Alpha- Glucosyl Fluoride within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1001

b:12.7
occ:1.00
 ND1 A:HIS68 2.0 12.3 1.0
ND1 B:HIS68 2.0 12.5 1.0
OD2 A:ASP65 2.1 10.3 1.0
OD2 B:ASP65 2.1 10.1 1.0
CG B:ASP65 2.7 11.4 1.0
CG A:ASP65 2.8 11.4 1.0
OD1 B:ASP65 2.8 12.8 1.0
OD1 A:ASP65 2.8 12.9 1.0
CE1 A:HIS68 3.0 14.4 1.0
CE1 B:HIS68 3.0 14.7 1.0
CG A:HIS68 3.0 12.6 1.0
CG B:HIS68 3.1 12.5 1.0
CB A:HIS68 3.4 12.9 1.0
CB B:HIS68 3.4 12.8 1.0
NE2 A:HIS68 4.1 13.0 1.0
NE2 B:HIS68 4.1 12.8 1.0
O B:HOH563 4.1 22.0 1.0
CD2 A:HIS68 4.2 12.3 1.0
CD2 B:HIS68 4.2 12.4 1.0
O A:HOH478 4.2 20.1 1.0
CB B:ASP65 4.2 10.5 1.0
CB A:ASP65 4.2 10.6 1.0
O B:HOH700 4.7 18.1 1.0
O A:HOH548 4.8 15.6 1.0
CA B:HIS68 4.8 14.3 1.0
CA A:HIS68 4.8 14.3 1.0
N B:HIS68 4.9 13.2 1.0

Reference:

S.Pengthaisong, S.G.Withers, B.Kuaprasert, J.R.Ketudat Cairns. Structural Investigation of the Basis For Cellooligosaccharide Synthesis By Rice BGLU1 Glycosynthases To Be Published.
Page generated: Sat Oct 26 15:41:14 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy