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Zinc in PDB 3rmq: Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant)

Protein crystallography data

The structure of Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant), PDB code: 3rmq was solved by K.Michalska, A.Weger, C.Hatzos-Skintges, J.Bearden, A.Joachimiak, Midwestcenter For Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.93 / 1.85
Space group P 61
Cell size a, b, c (Å), α, β, γ (°) 79.225, 79.225, 47.051, 90.00, 90.00, 120.00
R / Rfree (%) 16.2 / 19.1

Other elements in 3rmq:

The structure of Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant) also contains other interesting chemical elements:

Chlorine (Cl) 7 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant) (pdb code 3rmq). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant), PDB code: 3rmq:

Zinc binding site 1 out of 1 in 3rmq

Go back to Zinc Binding Sites List in 3rmq
Zinc binding site 1 out of 1 in the Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn114

b:17.5
occ:1.00
ND1 A:HIS14 2.1 13.3 1.0
SG A:CYS59 2.3 15.1 1.0
SG A:CYS56 2.4 16.3 1.0
SG A:CYS33 2.4 17.5 1.0
CE1 A:HIS14 2.9 15.6 1.0
CB A:CYS56 3.1 14.7 1.0
CB A:CYS33 3.2 20.1 1.0
CG A:HIS14 3.2 15.1 1.0
CB A:CYS59 3.3 13.4 1.0
CB A:HIS14 3.7 14.3 1.0
CB A:ALA31 3.9 15.7 1.0
N A:CYS59 3.9 18.3 1.0
O A:HOH146 4.0 27.8 1.0
NE2 A:HIS14 4.1 16.3 1.0
CA A:HIS14 4.1 15.6 1.0
CA A:CYS59 4.1 16.5 1.0
N A:CYS33 4.2 16.5 1.0
CD2 A:HIS14 4.3 15.6 1.0
CA A:CYS33 4.3 19.2 1.0
OE1 A:GLU35 4.5 28.4 0.4
CA A:CYS56 4.6 12.9 1.0
N A:VAL15 4.8 12.4 1.0
CB A:VAL58 5.0 17.3 1.0

Reference:

K.Michalska, A.Weger, C.Hatzos-Skintges, J.Bearden, A.Joachimiak. Crystal Structure of Uncharacterized Protein SVIR_20580 From Saccharomonospora Viridis (V71M Mutant) To Be Published.
Page generated: Sat Oct 26 14:57:16 2024

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