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Zinc in PDB 3kb1: Crystal Structure of the Nucleotide-Binding Protein AF_226 in Complex with Adp From Archaeoglobus Fulgidus, Northeast Structural Genomics Consortium Target GR157

Protein crystallography data

The structure of Crystal Structure of the Nucleotide-Binding Protein AF_226 in Complex with Adp From Archaeoglobus Fulgidus, Northeast Structural Genomics Consortium Target GR157, PDB code: 3kb1 was solved by F.Forouhar, S.Lew, M.Abashidze, J.Seetharaman, M.Mao, R.Xiao, C.Ciccosanti, H.Wang, J.K.Everett, R.Nair, T.B.Acton, B.Rost, G.T.Montelione, J.F.Hunt, L.Tong, Northeast Structural Genomics Consortium (Nesg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.90
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 51.440, 67.682, 79.403, 90.00, 90.09, 90.00
R / Rfree (%) 21.4 / 26.5

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of the Nucleotide-Binding Protein AF_226 in Complex with Adp From Archaeoglobus Fulgidus, Northeast Structural Genomics Consortium Target GR157 (pdb code 3kb1). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of the Nucleotide-Binding Protein AF_226 in Complex with Adp From Archaeoglobus Fulgidus, Northeast Structural Genomics Consortium Target GR157, PDB code: 3kb1:

Zinc binding site 1 out of 1 in 3kb1

Go back to Zinc Binding Sites List in 3kb1
Zinc binding site 1 out of 1 in the Crystal Structure of the Nucleotide-Binding Protein AF_226 in Complex with Adp From Archaeoglobus Fulgidus, Northeast Structural Genomics Consortium Target GR157


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Nucleotide-Binding Protein AF_226 in Complex with Adp From Archaeoglobus Fulgidus, Northeast Structural Genomics Consortium Target GR157 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn302

b:65.1
occ:1.00
SG A:CYS196 2.3 73.4 1.0
SG B:CYS196 2.4 73.0 1.0
SG A:CYS199 2.5 76.9 1.0
SG B:CYS199 2.5 80.3 1.0
CB A:CYS196 2.9 65.4 1.0
CB B:CYS196 3.0 65.6 1.0
CB A:CYS199 3.6 65.5 1.0
CB B:CYS199 3.6 67.5 1.0
N A:CYS199 3.9 72.0 1.0
N B:CYS199 3.9 70.2 1.0
CB A:GLU201 4.2 74.8 1.0
CB B:GLU201 4.2 73.9 1.0
CA A:CYS199 4.3 67.7 1.0
CB A:ASN198 4.3 82.0 1.0
CB B:ASN198 4.3 79.7 1.0
CA B:CYS199 4.3 68.4 1.0
CA A:CYS196 4.4 61.3 1.0
CA B:CYS196 4.4 59.9 1.0
ND2 A:ASN198 4.6 81.7 1.0
ND2 B:ASN198 4.6 83.4 1.0
O A:CYS196 4.7 53.5 1.0
N A:GLU201 4.8 62.6 1.0
C A:ASN198 4.8 74.8 1.0
N B:GLU201 4.8 63.2 1.0
O B:CYS196 4.8 50.9 1.0
C B:ASN198 4.8 71.4 1.0
C A:CYS196 4.8 63.1 1.0
N A:GLY200 4.8 63.9 1.0
C A:CYS199 4.9 63.6 1.0
C B:CYS196 4.9 60.3 1.0
N B:GLY200 4.9 67.0 1.0
C B:CYS199 4.9 65.7 1.0
CG B:GLU201 5.0 77.3 1.0
CG A:GLU201 5.0 76.5 1.0
CA A:ASN198 5.0 74.8 1.0
CG A:ASN198 5.0 83.3 1.0

Reference:

F.Forouhar, S.Lew, M.Abashidze, J.Seetharaman, M.Mao, R.Xiao, C.Ciccosanti, H.Wang, J.K.Everett, R.Nair, T.B.Acton, B.Rost, G.T.Montelione, J.F.Hunt, L.Tong. Northeast Structural Genomics Consortium Target GR157 To Be Published.
Page generated: Sat Oct 26 07:45:11 2024

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