Zinc in PDB 3icj: Crystal Structure of An Uncharacterized Metal-Dependent Hydrolase From Pyrococcus Furiosus

The structure of Crystal Structure of An Uncharacterized Metal-Dependent Hydrolase From Pyrococcus Furiosus, PDB code: 3icj was solved by J.B.Bonanno, Y.Patskovsky, J.Freeman, K.T.Bain, S.Hu, S.Ozyurt, S.Wasserman, J.M.Sauder, F.M.Raushel, S.K.Burley, S.C.Almo, New York Sgxresearch Center For Structural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 1.95
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	58.869, 116.438, 169.660, 90.00, 90.00, 90.00
R / Rfree (%)	20.7 / 26.7

The binding sites of Zinc atom in the Crystal Structure of An Uncharacterized Metal-Dependent Hydrolase From Pyrococcus Furiosus (pdb code 3icj). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of An Uncharacterized Metal-Dependent Hydrolase From Pyrococcus Furiosus, PDB code: 3icj:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of An Uncharacterized Metal-Dependent Hydrolase From Pyrococcus Furiosus


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of An Uncharacterized Metal-Dependent Hydrolase From Pyrococcus Furiosus within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn601 b:50.6 occ:0.50 NE2 A:HIS99 2.3 37.9 1.0 NE2 A:HIS101 2.3 52.6 1.0 OQ1 A:KCX294 2.4 63.1 1.0 OD1 A:ASP432 2.4 43.6 1.0 CG A:ASP432 3.2 54.4 1.0 CX A:KCX294 3.2 69.4 1.0 CE1 A:HIS101 3.2 44.3 1.0 CD2 A:HIS99 3.2 45.0 1.0 CE1 A:HIS99 3.3 42.4 1.0 OD2 A:ASP432 3.3 53.8 1.0 CD2 A:HIS101 3.3 49.3 1.0 OQ2 A:KCX294 3.4 67.7 1.0 ZN A:ZN602 3.5 66.7 0.5 NZ A:KCX294 4.3 58.6 1.0 NE2 A:HIS371 4.3 52.1 1.0 ND1 A:HIS101 4.4 52.6 1.0 ND1 A:HIS99 4.4 48.4 1.0 CG A:HIS99 4.4 41.0 1.0 CG A:HIS101 4.5 48.5 1.0 CB A:ASP432 4.5 49.8 1.0 CE1 A:HIS371 4.6 60.3 1.0 CA A:ASP432 5.0 42.4 1.0 CB A:MET240 5.0 39.6 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of An Uncharacterized Metal-Dependent Hydrolase From Pyrococcus Furiosus


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of An Uncharacterized Metal-Dependent Hydrolase From Pyrococcus Furiosus within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn602 b:66.7 occ:0.50 OQ2 A:KCX294 2.0 67.7 1.0 ND1 A:HIS346 2.1 59.7 1.0 NE2 A:HIS371 2.4 52.1 1.0 CE1 A:HIS346 2.9 51.5 1.0 CX A:KCX294 3.0 69.4 1.0 CD2 A:HIS371 3.1 45.5 1.0 OQ1 A:KCX294 3.2 63.1 1.0 CG A:HIS346 3.2 47.9 1.0 ZN A:ZN601 3.5 50.6 0.5 CE1 A:HIS371 3.5 60.3 1.0 CB A:HIS346 3.7 38.5 1.0 CE1 A:PHE296 4.0 58.5 1.0 NE2 A:HIS346 4.1 49.3 1.0 NZ A:KCX294 4.2 58.6 1.0 CE1 A:HIS99 4.2 42.4 1.0 NE2 A:HIS99 4.3 37.9 1.0 CD2 A:HIS346 4.3 48.9 1.0 OD2 A:ASP432 4.4 53.8 1.0 CG A:HIS371 4.4 43.4 1.0 ND1 A:HIS371 4.5 56.3 1.0 CD1 A:PHE296 4.5 48.4 1.0 CE A:KCX294 4.7 56.5 1.0 O A:HOH660 4.7 56.8 1.0 CA A:HIS346 4.8 36.7 1.0 CB A:GLU370 5.0 36.4 1.0

J.B.Bonanno, Y.Patskovsky, J.Freeman, K.T.Bain, S.Hu, S.Ozyurt, S.Wasserman, J.M.Sauder, F.M.Raushel, S.K.Burley, S.C.Almo. Crystal Structure of An Uncharacterized Metal-Dependent Hydrolase From Pyrococcus Furiosus To Be Published.