Zinc in PDB 3bvg: Manipulating the Coupled Folding and Binding Process Drives Affinity Maturation in A Protein-Protein Complex

The structure of Manipulating the Coupled Folding and Binding Process Drives Affinity Maturation in A Protein-Protein Complex, PDB code: 3bvg was solved by S.Cho, J.S.Eric, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 2.00
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	42.700, 42.700, 287.142, 90.00, 90.00, 90.00
R / Rfree (%)	21.3 / 27.6

The binding sites of Zinc atom in the Manipulating the Coupled Folding and Binding Process Drives Affinity Maturation in A Protein-Protein Complex (pdb code 3bvg). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Manipulating the Coupled Folding and Binding Process Drives Affinity Maturation in A Protein-Protein Complex, PDB code: 3bvg:

Zinc binding site 1 out of 1 in the Manipulating the Coupled Folding and Binding Process Drives Affinity Maturation in A Protein-Protein Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Manipulating the Coupled Folding and Binding Process Drives Affinity Maturation in A Protein-Protein Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn240 b:15.2 occ:1.00 NE2 A:HIS122 2.0 12.8 1.0 OD2 A:ASP83 2.1 5.7 1.0 ND1 A:HIS118 2.3 10.6 1.0 CG A:ASP83 2.8 7.0 1.0 OD1 A:ASP83 2.9 7.9 1.0 CD2 A:HIS122 2.9 12.5 1.0 CE1 A:HIS122 3.0 10.6 1.0 CE1 A:HIS118 3.1 8.4 1.0 CG A:HIS118 3.4 9.8 1.0 CB A:HIS118 3.8 10.8 1.0 CA A:HIS118 3.9 10.7 1.0 O A:HOH241 4.1 6.7 1.0 CG A:HIS122 4.1 16.8 1.0 ND1 A:HIS122 4.1 14.8 1.0 O A:HIS118 4.2 11.2 1.0 CB A:ASP83 4.2 5.7 1.0 NE2 A:HIS118 4.3 12.2 1.0 CD2 A:HIS118 4.4 12.1 1.0 C A:HIS118 4.4 12.3 1.0 CG A:LYS37 4.6 16.1 1.0

S.Cho, C.P.Swaminathan, D.A.Bonsor, M.C.Kerzic, R.Guan, J.Yang, M.C.Kieke, P.S.Andersen, D.M.Kranz, R.A.Mariuzza, E.J.Sundberg. Assessing Energetic Contributions to Binding From A Disordered Region in A Protein-Protein Interaction Biochemistry V. 49 9256 2010.
ISSN: ISSN 0006-2960
PubMed: 20836565
DOI: 10.1021/BI1008968