Zinc in PDB 3bb6: Crystal Structure of the P64488 Protein From E.Coli (Strain K12). Northeast Structural Genomics Consortium Target ER596

The structure of Crystal Structure of the P64488 Protein From E.Coli (Strain K12). Northeast Structural Genomics Consortium Target ER596, PDB code: 3bb6 was solved by A.P.Kuzin, M.Su, J.Seetharaman, D.Wang, H.Janjua, L.Owens, L.-C.Ma, R.Xiao, J.Liu, M.C.Baran, T.B.Acton, B.Rost, G.T.Montelione, L.Tong, J.F.Hunt, Northeast Structural Genomics Consortium (Nesg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 2.30
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	68.943, 82.472, 109.924, 90.00, 90.00, 90.00
R / Rfree (%)	21.9 / 26.1

The binding sites of Zinc atom in the Crystal Structure of the P64488 Protein From E.Coli (Strain K12). Northeast Structural Genomics Consortium Target ER596 (pdb code 3bb6). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 4 binding sites of Zinc where determined in the Crystal Structure of the P64488 Protein From E.Coli (Strain K12). Northeast Structural Genomics Consortium Target ER596, PDB code: 3bb6:
Jump to Zinc binding site number: 1; 2; 3; 4;

Zinc binding site 1 out of 4 in the Crystal Structure of the P64488 Protein From E.Coli (Strain K12). Northeast Structural Genomics Consortium Target ER596


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the P64488 Protein From E.Coli (Strain K12). Northeast Structural Genomics Consortium Target ER596 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn128 b:86.1 occ:1.00 NE2 A:HIS83 2.6 21.9 1.0 OD1 A:ASP32 2.7 44.6 1.0 NE2 A:HIS30 3.0 28.9 1.0 CD2 A:HIS83 3.4 20.6 1.0 CG A:ASP32 3.5 43.6 1.0 CE1 A:HIS30 3.6 30.3 1.0 OD2 A:ASP32 3.6 45.5 1.0 CE1 A:HIS83 3.7 19.8 1.0 CD2 A:HIS30 4.2 29.8 1.0 CG1 A:ILE26 4.3 35.9 1.0 CD1 A:ILE26 4.6 39.0 1.0 CG A:HIS83 4.6 21.4 1.0 ND1 A:HIS83 4.8 19.8 1.0 ND1 A:HIS30 4.8 31.7 1.0 CD2 A:PHE77 4.9 11.3 1.0 CB A:ASP32 5.0 42.0 1.0

Zinc binding site 2 out of 4 in the Crystal Structure of the P64488 Protein From E.Coli (Strain K12). Northeast Structural Genomics Consortium Target ER596


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of the P64488 Protein From E.Coli (Strain K12). Northeast Structural Genomics Consortium Target ER596 within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn128 b:98.7 occ:1.00 NE2 B:HIS83 2.6 23.5 1.0 OD1 B:ASP32 2.8 45.0 1.0 NE2 B:HIS30 3.0 28.8 1.0 OD2 B:ASP32 3.4 44.9 1.0 CD2 B:HIS83 3.4 21.2 1.0 CG B:ASP32 3.5 42.9 1.0 CE1 B:HIS30 3.7 29.9 1.0 CE1 B:HIS83 3.7 22.7 1.0 CG1 B:ILE26 4.0 39.3 1.0 CD1 B:ILE26 4.1 39.9 1.0 CD2 B:HIS30 4.1 29.0 1.0 CG B:HIS83 4.6 22.2 1.0 ND1 B:HIS83 4.8 22.7 1.0 ND1 B:HIS30 4.9 29.9 1.0 CB B:ASP32 4.9 41.0 1.0

Zinc binding site 3 out of 4 in the Crystal Structure of the P64488 Protein From E.Coli (Strain K12). Northeast Structural Genomics Consortium Target ER596


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Crystal Structure of the P64488 Protein From E.Coli (Strain K12). Northeast Structural Genomics Consortium Target ER596 within 5.0Å range: probe atom residue distance (Å) B Occ C:Zn128 b:30.7 occ:1.00 OD2 C:ASP32 2.2 21.9 1.0 NE2 C:HIS83 2.3 18.2 1.0 NE2 C:HIS30 2.4 16.8 1.0 CG C:ASP32 2.9 24.1 1.0 OD1 C:ASP32 3.0 22.9 1.0 CE1 C:HIS83 3.1 18.8 1.0 CE1 C:HIS30 3.3 17.3 1.0 CD2 C:HIS83 3.3 17.9 1.0 CD2 C:HIS30 3.3 16.2 1.0 O C:HOH156 3.4 19.3 1.0 ND1 C:HIS83 4.2 20.8 1.0 CG C:HIS83 4.4 18.8 1.0 CB C:ASP32 4.4 25.2 1.0 ND1 C:HIS30 4.4 14.1 1.0 CG C:HIS30 4.5 12.6 1.0 CD2 C:PHE77 4.5 21.0 1.0 CG1 C:ILE26 4.6 22.7 1.0 CE2 C:PHE77 4.6 19.9 1.0

Zinc binding site 4 out of 4 in the Crystal Structure of the P64488 Protein From E.Coli (Strain K12). Northeast Structural Genomics Consortium Target ER596


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 4 of Crystal Structure of the P64488 Protein From E.Coli (Strain K12). Northeast Structural Genomics Consortium Target ER596 within 5.0Å range: probe atom residue distance (Å) B Occ D:Zn128 b:39.1 occ:1.00 NE2 D:HIS83 2.3 20.8 1.0 OD2 D:ASP32 2.4 39.5 1.0 CE1 D:HIS30 2.5 27.8 1.0 CG D:ASP32 3.1 39.4 1.0 NE2 D:HIS30 3.1 28.4 1.0 OD1 D:ASP32 3.1 36.7 1.0 CD2 D:HIS83 3.2 21.4 1.0 CE1 D:HIS83 3.4 22.2 1.0 O D:HOH134 3.5 20.8 1.0 ND1 D:HIS30 3.6 29.6 1.0 CD2 D:PHE77 4.1 22.5 1.0 CE2 D:PHE77 4.1 22.5 1.0 CG D:HIS83 4.4 23.1 1.0 CD2 D:HIS30 4.4 28.9 1.0 ND1 D:HIS83 4.4 23.5 1.0 CB D:ASP32 4.5 37.8 1.0 CG1 D:ILE26 4.6 25.9 1.0 CG D:HIS30 4.7 30.1 1.0 CD1 D:ILE26 5.0 26.7 1.0

A.P.Kuzin, M.Su, J.Seetharaman, D.Wang, H.Janjua, L.Owens, L.-C.Ma, R.Xiao, J.Liu, M.C.Baran, T.B.Acton, B.Rost, G.T.Montelione, L.Tong, J.F.Hunt. X-Ray Structure of the P64488 From E.Coli (Strain K12). To Be Published.