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Zinc in PDB 2yuc: Solution Structure of the Traf-Type Zinc Finger Domains (102-164) From Human Tnf Receptor Associated Factor 4

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Traf-Type Zinc Finger Domains (102-164) From Human Tnf Receptor Associated Factor 4 (pdb code 2yuc). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Traf-Type Zinc Finger Domains (102-164) From Human Tnf Receptor Associated Factor 4, PDB code: 2yuc:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2yuc

Go back to Zinc Binding Sites List in 2yuc
Zinc binding site 1 out of 2 in the Solution Structure of the Traf-Type Zinc Finger Domains (102-164) From Human Tnf Receptor Associated Factor 4


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Traf-Type Zinc Finger Domains (102-164) From Human Tnf Receptor Associated Factor 4 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
NE2 A:HIS35 2.1 0.0 1.0
SG A:CYS23 2.2 0.0 1.0
SG A:CYS40 2.3 0.0 1.0
SG A:CYS19 2.4 0.0 1.0
HD2 A:PRO41 2.6 0.0 1.0
CD2 A:HIS35 2.7 0.0 1.0
HD2 A:HIS35 2.8 0.0 1.0
HB2 A:CYS40 3.2 0.0 1.0
HB2 A:CYS19 3.2 0.0 1.0
HB2 A:ASN21 3.2 0.0 1.0
CE1 A:HIS35 3.2 0.0 1.0
CB A:CYS19 3.2 0.0 1.0
CB A:CYS40 3.3 0.0 1.0
HA A:CYS40 3.3 0.0 1.0
HB3 A:CYS19 3.3 0.0 1.0
HB3 A:CYS23 3.4 0.0 1.0
HD22 A:LEU36 3.5 0.0 1.0
CB A:CYS23 3.5 0.0 1.0
HE1 A:HIS35 3.6 0.0 1.0
CD A:PRO41 3.7 0.0 1.0
CA A:CYS40 3.8 0.0 1.0
CG A:HIS35 3.9 0.0 1.0
HB2 A:MET25 4.0 0.0 1.0
HD21 A:LEU36 4.1 0.0 1.0
HD3 A:PRO41 4.1 0.0 1.0
ND1 A:HIS35 4.1 0.0 1.0
HB2 A:CYS23 4.1 0.0 1.0
CD2 A:LEU36 4.1 0.0 1.0
CB A:ASN21 4.2 0.0 1.0
H A:CYS23 4.2 0.0 1.0
HD23 A:LEU36 4.2 0.0 1.0
HB3 A:CYS40 4.2 0.0 1.0
HG2 A:PRO41 4.3 0.0 1.0
HD21 A:ASN21 4.3 0.0 1.0
H A:LYS42 4.4 0.0 1.0
CG A:ASN21 4.4 0.0 1.0
HB3 A:MET25 4.4 0.0 1.0
H A:ASN21 4.5 0.0 1.0
ND2 A:ASN21 4.5 0.0 1.0
N A:PRO41 4.5 0.0 1.0
CG A:PRO41 4.5 0.0 1.0
HB3 A:ASN21 4.6 0.0 1.0
C A:CYS40 4.6 0.0 1.0
O A:MET25 4.6 0.0 1.0
CA A:CYS23 4.7 0.0 1.0
HA A:LEU36 4.7 0.0 1.0
CA A:CYS19 4.7 0.0 1.0
CB A:MET25 4.7 0.0 1.0
HD2 A:PRO20 4.8 0.0 1.0
N A:CYS23 4.8 0.0 1.0
HD22 A:LEU27 4.8 0.0 1.0
O A:CYS23 4.9 0.0 1.0
HG3 A:PRO41 4.9 0.0 1.0
HA A:CYS19 5.0 0.0 1.0
N A:CYS40 5.0 0.0 1.0
HD22 A:ASN21 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 2yuc

Go back to Zinc Binding Sites List in 2yuc
Zinc binding site 2 out of 2 in the Solution Structure of the Traf-Type Zinc Finger Domains (102-164) From Human Tnf Receptor Associated Factor 4


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Traf-Type Zinc Finger Domains (102-164) From Human Tnf Receptor Associated Factor 4 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.0
occ:1.00
NE2 A:HIS62 2.0 0.0 1.0
SG A:CYS50 2.3 0.0 1.0
SG A:CYS47 2.3 0.0 1.0
SG A:CYS66 2.4 0.0 1.0
HD2 A:PRO67 2.7 0.0 1.0
H A:CYS50 2.8 0.0 1.0
CD2 A:HIS62 2.9 0.0 1.0
HB3 A:CYS50 3.0 0.0 1.0
CE1 A:HIS62 3.0 0.0 1.0
HB2 A:CYS66 3.0 0.0 1.0
HE2 A:PHE54 3.1 0.0 1.0
HD2 A:HIS62 3.2 0.0 1.0
HB2 A:CYS47 3.2 0.0 1.0
CB A:CYS47 3.2 0.0 1.0
CB A:CYS66 3.2 0.0 1.0
CB A:CYS50 3.2 0.0 1.0
HE1 A:HIS62 3.3 0.0 1.0
HB3 A:CYS47 3.3 0.0 1.0
HB2 A:PHE49 3.4 0.0 1.0
HA A:CYS66 3.5 0.0 1.0
N A:CYS50 3.6 0.0 1.0
CD A:PRO67 3.7 0.0 1.0
CA A:CYS66 3.9 0.0 1.0
H A:GLN68 4.0 0.0 1.0
CA A:CYS50 4.0 0.0 1.0
ND1 A:HIS62 4.1 0.0 1.0
CG A:HIS62 4.1 0.0 1.0
HB2 A:CYS50 4.1 0.0 1.0
HB3 A:CYS66 4.1 0.0 1.0
CE2 A:PHE54 4.2 0.0 1.0
HD2 A:PHE49 4.2 0.0 1.0
H A:PHE49 4.2 0.0 1.0
H A:GLY51 4.2 0.0 1.0
HG2 A:PRO67 4.2 0.0 1.0
HD3 A:PRO67 4.2 0.0 1.0
CB A:PHE49 4.5 0.0 1.0
N A:PRO67 4.5 0.0 1.0
CG A:PRO67 4.5 0.0 1.0
C A:CYS66 4.6 0.0 1.0
O A:HIS62 4.7 0.0 1.0
HD2 A:PHE54 4.7 0.0 1.0
CA A:CYS47 4.7 0.0 1.0
N A:GLY51 4.7 0.0 1.0
C A:PHE49 4.8 0.0 1.0
C A:CYS50 4.8 0.0 1.0
HA A:CYS50 4.9 0.0 1.0
H A:CYS52 4.9 0.0 1.0
CD2 A:PHE54 4.9 0.0 1.0
HG3 A:PRO67 4.9 0.0 1.0
HZ A:PHE54 4.9 0.0 1.0
N A:PHE49 4.9 0.0 1.0
HA A:CYS47 4.9 0.0 1.0
HB2 A:GLN68 5.0 0.0 1.0
HD1 A:HIS62 5.0 0.0 1.0
N A:GLN68 5.0 0.0 1.0
CA A:PHE49 5.0 0.0 1.0

Reference:

F.Hayashi, T.Suetake, S.Yokoyama. Solution Structure of the Traf-Type Zinc Finger Domains (102-164) From Human Tnf Receptor Associated Factor 4 To Be Published.
Page generated: Thu Oct 24 10:27:56 2024

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