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Zinc in PDB 2yr2: Crystal Structure of the Hypothetical Regulator From Sulfolobus Tokodaii

Protein crystallography data

The structure of Crystal Structure of the Hypothetical Regulator From Sulfolobus Tokodaii, PDB code: 2yr2 was solved by T.S.Kumarevel, T.Tanaka, M.Nishio, S.Yokoyama, Riken Structuralgenomics/Proteomics Initiative (Rsgi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.01
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 106.258, 41.928, 70.579, 90.00, 109.22, 90.00
R / Rfree (%) 23.4 / 27.9

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of the Hypothetical Regulator From Sulfolobus Tokodaii (pdb code 2yr2). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of the Hypothetical Regulator From Sulfolobus Tokodaii, PDB code: 2yr2:

Zinc binding site 1 out of 1 in 2yr2

Go back to Zinc Binding Sites List in 2yr2
Zinc binding site 1 out of 1 in the Crystal Structure of the Hypothetical Regulator From Sulfolobus Tokodaii


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Hypothetical Regulator From Sulfolobus Tokodaii within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn1001

b:25.1
occ:1.00
OE1 B:GLU87 1.9 26.5 1.0
OD1 B:ASP85 2.1 29.8 1.0
CG B:ASP85 2.9 28.4 1.0
CD B:GLU87 2.9 26.5 1.0
O B:ASP85 3.1 35.3 1.0
OD2 B:ASP85 3.2 24.7 1.0
OE2 B:GLU87 3.4 25.4 1.0
C B:ASP85 4.1 33.7 1.0
CG B:GLU87 4.2 26.2 1.0
CB B:ASP85 4.2 28.6 1.0
CB B:GLU87 4.4 28.7 1.0
CA B:ASP85 4.5 30.2 1.0
N B:GLU87 4.6 29.9 1.0
CB B:ARG86 4.9 39.1 1.0

Reference:

T.S.Kumarevel, T.Tanaka, M.Nishio, S.Yokoyama. Crystal Structure of the Hypothetical Regulator From Sulfolobus Tokodaii To Be Published.
Page generated: Thu Oct 17 05:56:01 2024

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