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Zinc in PDB 2xy4: X-Ray Structure of Znua-Wt From Salmonella Enterica

Protein crystallography data

The structure of X-Ray Structure of Znua-Wt From Salmonella Enterica, PDB code: 2xy4 was solved by F.Alaleona, A.Ilari, A.Battistoni, P.Petrarca, E.Chiancone, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.71
Space group P 63
Cell size a, b, c (Å), α, β, γ (°) 143.650, 143.650, 30.811, 90.00, 90.00, 120.00
R / Rfree (%) 20.939 / 24.402

Zinc Binding Sites:

The binding sites of Zinc atom in the X-Ray Structure of Znua-Wt From Salmonella Enterica (pdb code 2xy4). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the X-Ray Structure of Znua-Wt From Salmonella Enterica, PDB code: 2xy4:

Zinc binding site 1 out of 1 in 2xy4

Go back to Zinc Binding Sites List in 2xy4
Zinc binding site 1 out of 1 in the X-Ray Structure of Znua-Wt From Salmonella Enterica


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of X-Ray Structure of Znua-Wt From Salmonella Enterica within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:12.8
occ:0.70
OE2 A:GLU59 2.0 30.2 0.7
OE1 A:GLU59 2.0 27.4 0.7
NE2 A:HIS211 2.1 23.8 1.0
NE2 A:HIS140 2.1 29.8 0.7
NE2 A:HIS147 2.1 16.9 1.0
O A:HOH2202 2.1 27.4 1.0
CD A:GLU59 2.2 34.3 0.7
CE1 A:HIS211 2.9 26.0 1.0
CE1 A:HIS147 2.9 20.1 1.0
CD2 A:HIS140 3.0 36.0 0.7
CE1 A:HIS140 3.1 35.1 0.7
CD2 A:HIS147 3.2 18.6 1.0
CD2 A:HIS211 3.2 25.5 1.0
CG A:GLU59 3.7 38.9 0.7
ND1 A:HIS211 4.1 27.0 1.0
ND1 A:HIS147 4.1 18.0 1.0
ND1 A:HIS140 4.2 36.9 0.7
CG A:HIS140 4.2 39.5 0.7
CG A:HIS211 4.3 26.8 1.0
CG A:HIS147 4.3 17.8 1.0
O A:HOH2029 4.5 34.4 1.0
CB A:GLU59 4.6 42.3 0.7
CB A:ALA213 4.8 27.5 1.0

Reference:

A.Ilari, F.Alaleona, P.Petrarca, A.Battistoni, E.Chiancone. The X-Ray Structure of the Zinc Transporter Znua From Salmonella Enterica Discloses A Unique Triad of Zinc Coordinating Histidines. J.Mol.Biol. V. 409 630 2011.
ISSN: ISSN 0022-2836
PubMed: 21530543
DOI: 10.1016/J.JMB.2011.04.036
Page generated: Wed Aug 20 06:55:21 2025

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