Zinc in PDB 2mf8: Haddock Model of MYT1 F4F5 - Dna Complex

The binding sites of Zinc atom in the Haddock Model of MYT1 F4F5 - Dna Complex (pdb code 2mf8). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Haddock Model of MYT1 F4F5 - Dna Complex, PDB code: 2mf8:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Haddock Model of MYT1 F4F5 - Dna Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Haddock Model of MYT1 F4F5 - Dna Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn901 b:0.0 occ:1.00 SG A:CYS826 1.9 0.0 1.0 SG A:CYS807 1.9 0.0 1.0 HB3 A:CYS807 2.2 0.0 1.0 NE2 A:HIS820 2.2 0.0 1.0 CB A:CYS807 2.4 0.0 1.0 SG A:CYS802 2.5 0.0 1.0 HB2 A:CYS807 2.6 0.0 1.0 HB3 A:CYS826 2.8 0.0 1.0 CB A:CYS826 2.8 0.0 1.0 HA A:CYS826 2.8 0.0 1.0 HB A:THR804 3.2 0.0 1.0 CE1 A:HIS820 3.2 0.0 1.0 CD2 A:HIS820 3.3 0.0 1.0 CA A:CYS826 3.3 0.0 1.0 HE1 A:HIS820 3.4 0.0 1.0 HD2 A:PRO827 3.4 0.0 1.0 HB2 A:CYS802 3.4 0.0 1.0 HD2 A:HIS820 3.5 0.0 1.0 CB A:CYS802 3.5 0.0 1.0 OG1 A:THR804 3.7 0.0 1.0 HB2 A:CYS826 3.7 0.0 1.0 H A:GLY809 3.8 0.0 1.0 HB3 A:CYS802 3.8 0.0 1.0 CA A:CYS807 3.8 0.0 1.0 HA2 A:GLY809 3.9 0.0 1.0 CB A:THR804 3.9 0.0 1.0 CD A:PRO827 4.3 0.0 1.0 C A:CYS807 4.3 0.0 1.0 HA A:CYS807 4.3 0.0 1.0 N A:GLY809 4.4 0.0 1.0 N A:CYS826 4.4 0.0 1.0 C A:CYS826 4.4 0.0 1.0 ND1 A:HIS820 4.4 0.0 1.0 CG A:HIS820 4.4 0.0 1.0 HG23 A:THR804 4.5 0.0 1.0 HG1 A:THR804 4.5 0.0 1.0 H A:THR804 4.5 0.0 1.0 HD3 A:PRO827 4.6 0.0 1.0 H A:CYS807 4.6 0.0 1.0 N A:ASP808 4.6 0.0 1.0 H A:ASP808 4.6 0.0 1.0 CA A:GLY809 4.7 0.0 1.0 H A:CYS826 4.7 0.0 1.0 N A:PRO827 4.7 0.0 1.0 N A:CYS807 4.7 0.0 1.0 CG2 A:THR804 4.7 0.0 1.0 O A:THR804 4.9 0.0 1.0 HG22 A:THR804 4.9 0.0 1.0 CA A:CYS802 4.9 0.0 1.0 H A:CYS802 4.9 0.0 1.0 HD22 A:LEU828 5.0 0.0 1.0 O A:CYS807 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the Haddock Model of MYT1 F4F5 - Dna Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Haddock Model of MYT1 F4F5 - Dna Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn902 b:0.0 occ:1.00 HB3 A:CYS851 1.6 0.0 1.0 SG A:CYS846 2.0 0.0 1.0 SG A:CYS870 2.0 0.0 1.0 CB A:CYS851 2.2 0.0 1.0 HB A:THR848 2.2 0.0 1.0 SG A:CYS851 2.4 0.0 1.0 HB2 A:CYS851 2.5 0.0 1.0 NE2 A:HIS864 2.6 0.0 1.0 HB2 A:CYS846 2.8 0.0 1.0 OG1 A:THR848 2.9 0.0 1.0 CB A:THR848 2.9 0.0 1.0 CB A:CYS846 3.0 0.0 1.0 HG1 A:THR848 3.1 0.0 1.0 HB3 A:CYS870 3.3 0.0 1.0 CB A:CYS870 3.4 0.0 1.0 H A:THR848 3.4 0.0 1.0 HB3 A:CYS846 3.5 0.0 1.0 CA A:CYS851 3.6 0.0 1.0 CE1 A:HIS864 3.6 0.0 1.0 CD2 A:HIS864 3.7 0.0 1.0 HE1 A:HIS864 3.8 0.0 1.0 H A:GLY853 3.8 0.0 1.0 O A:THR848 3.8 0.0 1.0 HG22 A:THR848 3.8 0.0 1.0 HD2 A:HIS864 3.9 0.0 1.0 H A:CYS851 3.9 0.0 1.0 CA A:THR848 4.0 0.0 1.0 HA A:CYS870 4.0 0.0 1.0 CG2 A:THR848 4.0 0.0 1.0 C A:CYS851 4.0 0.0 1.0 HB2 A:CYS870 4.1 0.0 1.0 N A:THR848 4.1 0.0 1.0 H A:CYS846 4.2 0.0 1.0 CA A:CYS846 4.2 0.0 1.0 N A:CYS851 4.2 0.0 1.0 HA A:CYS851 4.3 0.0 1.0 HA2 A:GLY853 4.3 0.0 1.0 CA A:CYS870 4.3 0.0 1.0 C A:THR848 4.3 0.0 1.0 O A:CYS851 4.4 0.0 1.0 C A:CYS846 4.5 0.0 1.0 N A:ASP852 4.5 0.0 1.0 HG23 A:THR848 4.5 0.0 1.0 O A:ALA873 4.6 0.0 1.0 H A:ASP852 4.6 0.0 1.0 N A:GLY853 4.6 0.0 1.0 HD2 A:PRO871 4.6 0.0 1.0 O A:CYS846 4.6 0.0 1.0 HD2 A:LYS845 4.6 0.0 1.0 N A:CYS846 4.7 0.0 1.0 HG21 A:THR848 4.8 0.0 1.0 ND1 A:HIS864 4.8 0.0 1.0 HA A:THR848 4.9 0.0 1.0 CG A:HIS864 4.9 0.0 1.0 HD2 A:PRO847 4.9 0.0 1.0

R.Gamsjaeger, M.R.O'connell, L.Cubeddu, N.E.Shepherd, J.A.Lowry, A.H.Kwan, M.Vandevenne, M.K.Swanton, J.M.Matthews, J.P.Mackay. A Structural Analysis of Dna Binding By Myelin Transcription Factor 1 Double Zinc Fingers. J.Biol.Chem. V. 288 35180 2013.
ISSN: ISSN 0021-9258
PubMed: 24097990
DOI: 10.1074/JBC.M113.482075