Zinc in PDB 2mdg: Solution uc(Nmr) Structure of Zinc Finger Protein 423 From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR7298F
Zinc Binding Sites:
The binding sites of Zinc atom in the Solution uc(Nmr) Structure of Zinc Finger Protein 423 From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR7298F
(pdb code 2mdg). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Solution uc(Nmr) Structure of Zinc Finger Protein 423 From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR7298F, PDB code: 2mdg:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 2mdg
Go back to
Zinc Binding Sites List in 2mdg
Zinc binding site 1 out
of 2 in the Solution uc(Nmr) Structure of Zinc Finger Protein 423 From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR7298F
 Mono view
 Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Solution uc(Nmr) Structure of Zinc Finger Protein 423 From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR7298F within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn101
b:0.0
occ:1.00
|
NE2
|
A:HIS26
|
2.1
|
0.0
|
1.0
|
NE2
|
A:HIS22
|
2.1
|
0.0
|
1.0
|
SG
|
A:CYS9
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS6
|
2.3
|
0.0
|
1.0
|
CE1
|
A:HIS26
|
3.0
|
0.0
|
1.0
|
CE1
|
A:HIS22
|
3.0
|
0.0
|
1.0
|
CD2
|
A:HIS22
|
3.1
|
0.0
|
1.0
|
CD2
|
A:HIS26
|
3.1
|
0.0
|
1.0
|
HE1
|
A:HIS26
|
3.2
|
0.0
|
1.0
|
HE1
|
A:HIS22
|
3.3
|
0.0
|
1.0
|
H
|
A:CYS9
|
3.3
|
0.0
|
1.0
|
HB2
|
A:CYS9
|
3.3
|
0.0
|
1.0
|
HD2
|
A:HIS22
|
3.3
|
0.0
|
1.0
|
HD2
|
A:HIS26
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS9
|
3.5
|
0.0
|
1.0
|
HB
|
A:VAL8
|
3.5
|
0.0
|
1.0
|
HB2
|
A:CYS6
|
3.6
|
0.0
|
1.0
|
CB
|
A:CYS6
|
3.6
|
0.0
|
1.0
|
HB3
|
A:CYS6
|
3.8
|
0.0
|
1.0
|
HG23
|
A:THR12
|
4.0
|
0.0
|
1.0
|
N
|
A:CYS9
|
4.0
|
0.0
|
1.0
|
HG21
|
A:THR12
|
4.1
|
0.0
|
1.0
|
ND1
|
A:HIS26
|
4.2
|
0.0
|
1.0
|
ND1
|
A:HIS22
|
4.2
|
0.0
|
1.0
|
CG
|
A:HIS22
|
4.2
|
0.0
|
1.0
|
HG22
|
A:THR12
|
4.2
|
0.0
|
1.0
|
CG
|
A:HIS26
|
4.2
|
0.0
|
1.0
|
HG1
|
A:THR25
|
4.2
|
0.0
|
1.0
|
HB3
|
A:CYS9
|
4.3
|
0.0
|
1.0
|
CA
|
A:CYS9
|
4.3
|
0.0
|
1.0
|
CG2
|
A:THR12
|
4.3
|
0.0
|
1.0
|
OG1
|
A:THR25
|
4.5
|
0.0
|
1.0
|
CB
|
A:VAL8
|
4.6
|
0.0
|
1.0
|
O
|
A:HIS22
|
4.6
|
0.0
|
1.0
|
HA
|
A:CYS9
|
4.8
|
0.0
|
1.0
|
HG13
|
A:VAL8
|
4.9
|
0.0
|
1.0
|
H
|
A:SER10
|
4.9
|
0.0
|
1.0
|
CA
|
A:CYS6
|
4.9
|
0.0
|
1.0
|
C
|
A:VAL8
|
5.0
|
0.0
|
1.0
|
HG11
|
A:VAL8
|
5.0
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 2mdg
Go back to
Zinc Binding Sites List in 2mdg
Zinc binding site 2 out
of 2 in the Solution uc(Nmr) Structure of Zinc Finger Protein 423 From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR7298F
 Mono view
 Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Solution uc(Nmr) Structure of Zinc Finger Protein 423 From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR7298F within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn102
b:0.0
occ:1.00
|
NE2
|
A:HIS55
|
2.1
|
0.0
|
1.0
|
NE2
|
A:HIS51
|
2.1
|
0.0
|
1.0
|
SG
|
A:CYS35
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS38
|
2.3
|
0.0
|
1.0
|
H
|
A:CYS38
|
2.9
|
0.0
|
1.0
|
CE1
|
A:HIS55
|
3.0
|
0.0
|
1.0
|
CE1
|
A:HIS51
|
3.0
|
0.0
|
1.0
|
CD2
|
A:HIS55
|
3.0
|
0.0
|
1.0
|
CD2
|
A:HIS51
|
3.1
|
0.0
|
1.0
|
HD2
|
A:HIS55
|
3.3
|
0.0
|
1.0
|
HE1
|
A:HIS55
|
3.3
|
0.0
|
1.0
|
HE1
|
A:HIS51
|
3.3
|
0.0
|
1.0
|
HD2
|
A:HIS51
|
3.3
|
0.0
|
1.0
|
HB2
|
A:CYS35
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS35
|
3.5
|
0.0
|
1.0
|
HB
|
A:ILE37
|
3.5
|
0.0
|
1.0
|
HB2
|
A:GLU40
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS38
|
3.6
|
0.0
|
1.0
|
HB3
|
A:CYS38
|
3.6
|
0.0
|
1.0
|
HB3
|
A:CYS35
|
3.6
|
0.0
|
1.0
|
N
|
A:CYS38
|
3.7
|
0.0
|
1.0
|
H
|
A:GLU40
|
3.9
|
0.0
|
1.0
|
CA
|
A:CYS38
|
4.1
|
0.0
|
1.0
|
ND1
|
A:HIS55
|
4.1
|
0.0
|
1.0
|
ND1
|
A:HIS51
|
4.2
|
0.0
|
1.0
|
CG
|
A:HIS55
|
4.2
|
0.0
|
1.0
|
CG
|
A:HIS51
|
4.2
|
0.0
|
1.0
|
H
|
A:GLY39
|
4.3
|
0.0
|
1.0
|
HG2
|
A:GLU40
|
4.3
|
0.0
|
1.0
|
HB2
|
A:CYS38
|
4.5
|
0.0
|
1.0
|
H
|
A:ILE37
|
4.5
|
0.0
|
1.0
|
HG3
|
A:GLU40
|
4.5
|
0.0
|
1.0
|
CB
|
A:GLU40
|
4.5
|
0.0
|
1.0
|
CB
|
A:ILE37
|
4.6
|
0.0
|
1.0
|
HD13
|
A:ILE37
|
4.6
|
0.0
|
1.0
|
HA
|
A:LYS52
|
4.6
|
0.0
|
1.0
|
C
|
A:CYS38
|
4.6
|
0.0
|
1.0
|
N
|
A:GLY39
|
4.6
|
0.0
|
1.0
|
CG
|
A:GLU40
|
4.7
|
0.0
|
1.0
|
N
|
A:GLU40
|
4.7
|
0.0
|
1.0
|
C
|
A:ILE37
|
4.8
|
0.0
|
1.0
|
CA
|
A:CYS35
|
4.9
|
0.0
|
1.0
|
|
Reference:
K.Pederson,
D.Lee,
E.Kohan,
H.Janjua,
R.Xiao,
J.K.Everett,
T.B.Acton,
G.T.Montelione,
J.H.Prestegard.
Solution uc(Nmr) Structure of Zinc Finger Protein 423 From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR7298F To Be Published.
Page generated: Thu Oct 17 02:03:44 2024
|