Zinc in PDB 2ma5: Solution uc(Nmr) Structure of Phd Type Zinc Finger Domain of Lysine- Specific Demethylase 5B (Plu-1/JARID1B) From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR7375C

The binding sites of Zinc atom in the Solution uc(Nmr) Structure of Phd Type Zinc Finger Domain of Lysine- Specific Demethylase 5B (Plu-1/JARID1B) From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR7375C (pdb code 2ma5). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution uc(Nmr) Structure of Phd Type Zinc Finger Domain of Lysine- Specific Demethylase 5B (Plu-1/JARID1B) From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR7375C, PDB code: 2ma5:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution uc(Nmr) Structure of Phd Type Zinc Finger Domain of Lysine- Specific Demethylase 5B (Plu-1/JARID1B) From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR7375C


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution uc(Nmr) Structure of Phd Type Zinc Finger Domain of Lysine- Specific Demethylase 5B (Plu-1/JARID1B) From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR7375C within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn101 b:0.0 occ:1.00 NE2 A:HIS31 2.1 0.0 1.0 SG A:CYS4 2.3 0.0 1.0 SG A:CYS9 2.4 0.0 1.0 SG A:CYS34 2.4 0.0 1.0 CE1 A:HIS31 3.0 0.0 1.0 CD2 A:HIS31 3.0 0.0 1.0 HA A:CYS9 3.0 0.0 1.0 HD2 A:HIS31 3.3 0.0 1.0 HE1 A:HIS31 3.3 0.0 1.0 HB2 A:CYS34 3.4 0.0 1.0 HB3 A:CYS4 3.4 0.0 1.0 HB1 A:ALA6 3.5 0.0 1.0 CB A:CYS9 3.5 0.0 1.0 CB A:CYS4 3.5 0.0 1.0 CB A:CYS34 3.6 0.0 1.0 HB2 A:CYS9 3.7 0.0 1.0 CA A:CYS9 3.7 0.0 1.0 HB2 A:CYS4 3.9 0.0 1.0 HB3 A:CYS34 4.0 0.0 1.0 HD1 A:PHE30 4.0 0.0 1.0 H A:HIS31 4.0 0.0 1.0 CG A:HIS31 4.1 0.0 1.0 ND1 A:HIS31 4.1 0.0 1.0 H A:LEU10 4.3 0.0 1.0 C A:CYS9 4.3 0.0 1.0 O A:LEU10 4.4 0.0 1.0 HA A:PHE30 4.4 0.0 1.0 HB3 A:CYS9 4.4 0.0 1.0 N A:LEU10 4.5 0.0 1.0 CB A:ALA6 4.5 0.0 1.0 O A:CYS4 4.6 0.0 1.0 HB2 A:ALA6 4.7 0.0 1.0 HA A:CYS34 4.8 0.0 1.0 CA A:CYS34 4.9 0.0 1.0 CA A:CYS4 4.9 0.0 1.0 HB3 A:ALA6 4.9 0.0 1.0 HG2 A:GLN11 4.9 0.0 1.0 HD1 A:HIS31 4.9 0.0 1.0 N A:HIS31 5.0 0.0 1.0 HB3 A:PHE30 5.0 0.0 1.0 N A:CYS9 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the Solution uc(Nmr) Structure of Phd Type Zinc Finger Domain of Lysine- Specific Demethylase 5B (Plu-1/JARID1B) From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR7375C


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution uc(Nmr) Structure of Phd Type Zinc Finger Domain of Lysine- Specific Demethylase 5B (Plu-1/JARID1B) From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR7375C within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn102 b:0.0 occ:1.00 SG A:CYS49 2.3 0.0 1.0 SG A:CYS52 2.3 0.0 1.0 SG A:CYS26 2.3 0.0 1.0 SG A:CYS22 2.3 0.0 1.0 H A:CYS49 3.0 0.0 1.0 HB3 A:CYS22 3.4 0.0 1.0 HB3 A:CYS26 3.4 0.0 1.0 HB2 A:CYS52 3.4 0.0 1.0 HB3 A:CYS49 3.5 0.0 1.0 CB A:CYS49 3.5 0.0 1.0 CB A:CYS26 3.6 0.0 1.0 CB A:CYS22 3.6 0.0 1.0 CB A:CYS52 3.6 0.0 1.0 O A:CYS22 3.7 0.0 1.0 H A:SER25 3.8 0.0 1.0 N A:CYS49 3.8 0.0 1.0 H A:CYS52 3.9 0.0 1.0 HE2 A:PHE30 4.1 0.0 1.0 H A:ASN27 4.1 0.0 1.0 HA3 A:GLY24 4.1 0.0 1.0 CA A:CYS49 4.2 0.0 1.0 H A:CYS26 4.2 0.0 1.0 HB2 A:CYS22 4.2 0.0 1.0 HB3 A:CYS52 4.3 0.0 1.0 HB2 A:CYS26 4.3 0.0 1.0 HA A:ILE48 4.3 0.0 1.0 C A:CYS22 4.3 0.0 1.0 O A:ASP23 4.4 0.0 1.0 HB2 A:CYS49 4.4 0.0 1.0 N A:CYS26 4.4 0.0 1.0 HB2 A:ARG51 4.4 0.0 1.0 N A:CYS52 4.5 0.0 1.0 CA A:CYS26 4.6 0.0 1.0 O A:CYS49 4.6 0.0 1.0 CA A:CYS52 4.6 0.0 1.0 CA A:CYS22 4.6 0.0 1.0 H A:GLN28 4.7 0.0 1.0 C A:CYS49 4.7 0.0 1.0 N A:SER25 4.7 0.0 1.0 N A:ASN27 4.9 0.0 1.0 HG22 A:ILE48 4.9 0.0 1.0 C A:ASP23 4.9 0.0 1.0 C A:ILE48 4.9 0.0 1.0 HA A:CYS52 4.9 0.0 1.0 CA A:GLY24 5.0 0.0 1.0

F.Hassan, T.A.Ramelot, Y.Yang, J.R.Cort, H.Janjua, E.Kohan, D.Lee, R.Xiao, T.B.Acton, J.K.Everett, G.T.Montelione, M.A.Kennedy. Solution uc(Nmr) Structure of Phd Type Zinc Finger Domain of Lysine-Specific Demethylase 5B (Plu-1/JARID1B) From Homo Sapiens, Northeast Structural Genomics Consortium (Nesg) Target HR7375C To Be Published.