Atomistry » Zinc » PDB 2lgv-2m13 » 2lv9
Atomistry »
  Zinc »
    PDB 2lgv-2m13 »
      2lv9 »

Zinc in PDB 2lv9: Solution uc(Nmr) Structure of the Phd Domain of Human MLL5, Northeast Structural Genomics Consortium Target HR6512A

Enzymatic activity of Solution uc(Nmr) Structure of the Phd Domain of Human MLL5, Northeast Structural Genomics Consortium Target HR6512A

All present enzymatic activity of Solution uc(Nmr) Structure of the Phd Domain of Human MLL5, Northeast Structural Genomics Consortium Target HR6512A:
2.1.1.43;

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution uc(Nmr) Structure of the Phd Domain of Human MLL5, Northeast Structural Genomics Consortium Target HR6512A (pdb code 2lv9). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution uc(Nmr) Structure of the Phd Domain of Human MLL5, Northeast Structural Genomics Consortium Target HR6512A, PDB code: 2lv9:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2lv9

Go back to Zinc Binding Sites List in 2lv9
Zinc binding site 1 out of 2 in the Solution uc(Nmr) Structure of the Phd Domain of Human MLL5, Northeast Structural Genomics Consortium Target HR6512A


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution uc(Nmr) Structure of the Phd Domain of Human MLL5, Northeast Structural Genomics Consortium Target HR6512A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
ND1 A:HIS143 2.1 0.0 1.0
SG A:CYS121 2.3 0.0 1.0
SG A:CYS146 2.3 0.0 1.0
SG A:CYS123 2.3 0.0 1.0
HG3 A:GLN177 2.5 0.0 1.0
HB2 A:HIS143 2.8 0.0 1.0
CE1 A:HIS143 3.1 0.0 1.0
CG A:HIS143 3.1 0.0 1.0
H A:HIS143 3.2 0.0 1.0
HE1 A:HIS143 3.3 0.0 1.0
HB3 A:CYS121 3.3 0.0 1.0
HB3 A:CYS123 3.3 0.0 1.0
CB A:HIS143 3.5 0.0 1.0
CB A:CYS121 3.5 0.0 1.0
CB A:CYS123 3.5 0.0 1.0
CG A:GLN177 3.5 0.0 1.0
CB A:CYS146 3.5 0.0 1.0
HB2 A:CYS146 3.6 0.0 1.0
H A:CYS123 3.6 0.0 1.0
HB3 A:CYS146 3.7 0.0 1.0
CD A:GLN177 3.9 0.0 1.0
HB2 A:CYS121 4.0 0.0 1.0
HD11 A:ILE122 4.0 0.0 1.0
N A:HIS143 4.0 0.0 1.0
HG2 A:GLN177 4.1 0.0 1.0
O A:PHE125 4.2 0.0 1.0
NE2 A:HIS143 4.2 0.0 1.0
HB2 A:CYS123 4.2 0.0 1.0
CD2 A:HIS143 4.2 0.0 1.0
OE1 A:GLN177 4.3 0.0 1.0
HB3 A:HIS143 4.3 0.0 1.0
HB3 A:PHE125 4.3 0.0 1.0
CA A:HIS143 4.4 0.0 1.0
NE2 A:GLN177 4.4 0.0 1.0
N A:CYS123 4.4 0.0 1.0
HB2 A:GLN177 4.4 0.0 1.0
CB A:GLN177 4.5 0.0 1.0
HE21 A:GLN177 4.5 0.0 1.0
HB3 A:GLN177 4.5 0.0 1.0
CA A:CYS123 4.6 0.0 1.0
HA A:GLN142 4.6 0.0 1.0
H A:PHE125 4.6 0.0 1.0
CA A:CYS121 4.7 0.0 1.0
HD13 A:ILE122 4.8 0.0 1.0
HB3 A:GLN142 4.8 0.0 1.0
HB3 A:ALA173 4.8 0.0 1.0
CD1 A:ILE122 4.9 0.0 1.0
HD2 A:PHE125 4.9 0.0 1.0
CA A:CYS146 4.9 0.0 1.0
H A:ILE122 4.9 0.0 1.0
HE22 A:GLN177 5.0 0.0 1.0
C A:CYS121 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 2lv9

Go back to Zinc Binding Sites List in 2lv9
Zinc binding site 2 out of 2 in the Solution uc(Nmr) Structure of the Phd Domain of Human MLL5, Northeast Structural Genomics Consortium Target HR6512A


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution uc(Nmr) Structure of the Phd Domain of Human MLL5, Northeast Structural Genomics Consortium Target HR6512A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn202

b:0.0
occ:1.00
SG A:CYS135 2.3 0.0 1.0
SG A:CYS138 2.3 0.0 1.0
SG A:CYS163 2.4 0.0 1.0
SG A:CYS160 2.4 0.0 1.0
H A:CYS160 2.8 0.0 1.0
HG21 A:VAL140 3.2 0.0 1.0
H A:CYS138 3.2 0.0 1.0
HB2 A:CYS163 3.4 0.0 1.0
HB3 A:CYS138 3.5 0.0 1.0
HB3 A:CYS135 3.5 0.0 1.0
CB A:CYS135 3.5 0.0 1.0
CB A:CYS163 3.5 0.0 1.0
CB A:CYS138 3.6 0.0 1.0
CB A:CYS160 3.6 0.0 1.0
HB3 A:CYS160 3.6 0.0 1.0
N A:CYS160 3.7 0.0 1.0
HB3 A:LYS137 3.7 0.0 1.0
HB2 A:CYS135 3.8 0.0 1.0
HG22 A:VAL140 4.0 0.0 1.0
H A:CYS163 4.0 0.0 1.0
CG2 A:VAL140 4.0 0.0 1.0
N A:CYS138 4.0 0.0 1.0
HA A:LEU159 4.1 0.0 1.0
CA A:CYS160 4.2 0.0 1.0
HB3 A:CYS163 4.2 0.0 1.0
CA A:CYS138 4.4 0.0 1.0
HG23 A:VAL140 4.4 0.0 1.0
HB2 A:CYS138 4.4 0.0 1.0
N A:CYS163 4.4 0.0 1.0
H A:VAL140 4.5 0.0 1.0
HB2 A:CYS160 4.5 0.0 1.0
CA A:CYS163 4.6 0.0 1.0
HB2 A:ARG162 4.6 0.0 1.0
O A:CYS160 4.7 0.0 1.0
C A:CYS160 4.8 0.0 1.0
HD2 A:LYS137 4.8 0.0 1.0
C A:LEU159 4.8 0.0 1.0
CB A:LYS137 4.8 0.0 1.0
HD22 A:LEU159 4.9 0.0 1.0
CA A:CYS135 4.9 0.0 1.0
H A:LYS137 4.9 0.0 1.0
CA A:LEU159 4.9 0.0 1.0
HD21 A:LEU159 4.9 0.0 1.0
HG11 A:VAL140 5.0 0.0 1.0
C A:CYS138 5.0 0.0 1.0
HA A:CYS163 5.0 0.0 1.0

Reference:

A.Lemak, A.Yee, S.Houliston, M.Garcia, H.Wu, J.Min, G.T.Montelione, C.Arrowsmith. uc(Nmr) Solution Structure of the Human MLL5 Phd Domain (Casp Target) To Be Published.
Page generated: Thu Oct 17 01:55:48 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy