Atomistry » Zinc » PDB 2kzz-2lgl » 2l0z
Atomistry »
  Zinc »
    PDB 2kzz-2lgl »
      2l0z »

Zinc in PDB 2l0z: Solution Structure of A Zinc-Binding Domain From the Junin Virus Envelope Glycoprotein

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of A Zinc-Binding Domain From the Junin Virus Envelope Glycoprotein (pdb code 2l0z). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of A Zinc-Binding Domain From the Junin Virus Envelope Glycoprotein, PDB code: 2l0z:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2l0z

Go back to Zinc Binding Sites List in 2l0z
Zinc binding site 1 out of 2 in the Solution Structure of A Zinc-Binding Domain From the Junin Virus Envelope Glycoprotein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of A Zinc-Binding Domain From the Junin Virus Envelope Glycoprotein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn486

b:0.0
occ:1.00
NE2 A:HIS449 2.1 0.0 1.0
NE2 A:HIS485 2.1 0.0 1.0
NE2 A:HIS447 2.1 0.0 1.0
SG A:CYS455 2.3 0.0 1.0
CE1 A:HIS485 3.1 0.0 1.0
CE1 A:HIS449 3.1 0.0 1.0
CE1 A:HIS447 3.1 0.0 1.0
CD2 A:HIS485 3.1 0.0 1.0
CD2 A:HIS449 3.1 0.0 1.0
CD2 A:HIS447 3.1 0.0 1.0
HB2 A:CYS455 3.2 0.0 1.0
HE1 A:HIS449 3.3 0.0 1.0
HE1 A:HIS485 3.3 0.0 1.0
HE1 A:HIS447 3.3 0.0 1.0
HD2 A:HIS485 3.3 0.0 1.0
CB A:CYS455 3.3 0.0 1.0
HD2 A:HIS449 3.4 0.0 1.0
HD2 A:HIS447 3.4 0.0 1.0
HA A:CYS455 3.4 0.0 1.0
HG A:LEU457 3.7 0.0 1.0
HB2 A:ARG482 3.8 0.0 1.0
HB3 A:ARG482 3.9 0.0 1.0
HD2 A:PRO456 3.9 0.0 1.0
CA A:CYS455 4.0 0.0 1.0
HD13 A:LEU457 4.1 0.0 1.0
HD3 A:PRO456 4.1 0.0 1.0
HD12 A:LEU457 4.2 0.0 1.0
ND1 A:HIS485 4.2 0.0 1.0
ND1 A:HIS449 4.2 0.0 1.0
CG A:HIS485 4.2 0.0 1.0
ND1 A:HIS447 4.2 0.0 1.0
HB3 A:CYS455 4.3 0.0 1.0
CG A:HIS449 4.3 0.0 1.0
CG A:HIS447 4.3 0.0 1.0
CB A:ARG482 4.3 0.0 1.0
HG3 A:ARG482 4.3 0.0 1.0
CD A:PRO456 4.5 0.0 1.0
CD1 A:LEU457 4.5 0.0 1.0
CG A:LEU457 4.6 0.0 1.0
OXT A:HIS485 4.8 0.0 1.0
C A:CYS455 4.8 0.0 1.0
CG A:ARG482 4.9 0.0 1.0
H A:LEU457 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 2l0z

Go back to Zinc Binding Sites List in 2l0z
Zinc binding site 2 out of 2 in the Solution Structure of A Zinc-Binding Domain From the Junin Virus Envelope Glycoprotein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of A Zinc-Binding Domain From the Junin Virus Envelope Glycoprotein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn487

b:0.0
occ:1.00
O A:CYS469 1.9 0.0 1.0
ND1 A:HIS459 2.1 0.0 1.0
SG A:CYS469 2.3 0.0 1.0
SG A:CYS467 2.3 0.0 1.0
HB3 A:LYS471 2.5 0.0 1.0
HB3 A:HIS459 2.9 0.0 1.0
HB2 A:LYS471 2.9 0.0 1.0
C A:CYS469 3.0 0.0 1.0
CE1 A:HIS459 3.1 0.0 1.0
HB2 A:CYS467 3.1 0.0 1.0
CB A:LYS471 3.1 0.0 1.0
CG A:HIS459 3.1 0.0 1.0
HE1 A:HIS459 3.3 0.0 1.0
CB A:CYS469 3.3 0.0 1.0
CB A:CYS467 3.4 0.0 1.0
HB2 A:CYS469 3.4 0.0 1.0
CB A:HIS459 3.5 0.0 1.0
O A:GLY470 3.6 0.0 1.0
CA A:CYS469 3.7 0.0 1.0
C A:GLY470 3.7 0.0 1.0
N A:LYS471 3.8 0.0 1.0
HB3 A:CYS467 4.0 0.0 1.0
HG2 A:LYS471 4.1 0.0 1.0
N A:GLY470 4.1 0.0 1.0
CA A:LYS471 4.1 0.0 1.0
H A:TYR472 4.2 0.0 1.0
H A:LYS471 4.2 0.0 1.0
HB2 A:HIS459 4.2 0.0 1.0
H A:CYS469 4.2 0.0 1.0
NE2 A:HIS459 4.2 0.0 1.0
CG A:LYS471 4.2 0.0 1.0
O A:CYS467 4.2 0.0 1.0
N A:CYS469 4.2 0.0 1.0
CD2 A:HIS459 4.3 0.0 1.0
HB3 A:CYS469 4.3 0.0 1.0
HA A:HIS459 4.4 0.0 1.0
CA A:GLY470 4.5 0.0 1.0
C A:CYS467 4.5 0.0 1.0
CA A:CYS467 4.6 0.0 1.0
HD2 A:TYR472 4.6 0.0 1.0
CA A:HIS459 4.6 0.0 1.0
HA A:CYS469 4.6 0.0 1.0
H A:ARG460 4.7 0.0 1.0
HG3 A:LYS471 4.8 0.0 1.0
HA A:LYS471 4.9 0.0 1.0
H A:GLY470 4.9 0.0 1.0
N A:TYR472 4.9 0.0 1.0

Reference:

K.Briknarova, C.J.Thomas, J.York, J.H.Nunberg. Structure of A Zinc-Binding Domain in the Junin Virus Envelope Glycoprotein. J.Biol.Chem. V. 286 1528 2011.
ISSN: ISSN 0021-9258
PubMed: 21068387
DOI: 10.1074/JBC.M110.166025
Page generated: Thu Oct 17 01:43:26 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy