Zinc in PDB 2kqc: Second Pbz Domain of Human Aplf Protein

All present enzymatic activity of Second Pbz Domain of Human Aplf Protein:
4.2.99.18;

The binding sites of Zinc atom in the Second Pbz Domain of Human Aplf Protein (pdb code 2kqc). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Second Pbz Domain of Human Aplf Protein, PDB code: 2kqc:

Zinc binding site 1 out of 1 in the Second Pbz Domain of Human Aplf Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Second Pbz Domain of Human Aplf Protein within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn1001 b:0.0 occ:1.00 NE2 A:HIS434 1.9 0.0 1.0 NE2 A:HIS440 1.9 0.0 1.0 SG A:CYS427 2.3 0.0 1.0 SG A:CYS421 2.3 0.0 1.0 HD2 A:TYR423 2.7 0.0 1.0 CE1 A:HIS434 2.8 0.0 1.0 CD2 A:HIS440 2.9 0.0 1.0 HD3 A:ARG429 2.9 0.0 1.0 CE1 A:HIS440 2.9 0.0 1.0 CD2 A:HIS434 3.0 0.0 1.0 HE1 A:HIS434 3.0 0.0 1.0 HD2 A:HIS440 3.1 0.0 1.0 HB2 A:TYR423 3.2 0.0 1.0 HB2 A:CYS421 3.2 0.0 1.0 HE1 A:HIS440 3.2 0.0 1.0 HD2 A:HIS434 3.3 0.0 1.0 CB A:CYS421 3.3 0.0 1.0 HB2 A:CYS427 3.4 0.0 1.0 CB A:CYS427 3.4 0.0 1.0 HB3 A:CYS421 3.6 0.0 1.0 CD2 A:TYR423 3.7 0.0 1.0 HB3 A:CYS427 3.8 0.0 1.0 CD A:ARG429 3.9 0.0 1.0 HG2 A:ARG429 3.9 0.0 1.0 ND1 A:HIS434 4.0 0.0 1.0 CG A:HIS440 4.0 0.0 1.0 ND1 A:HIS440 4.1 0.0 1.0 CG A:HIS434 4.1 0.0 1.0 H A:GLY424 4.1 0.0 1.0 HZ2 A:LYS435 4.2 0.0 1.0 CB A:TYR423 4.2 0.0 1.0 HE A:ARG429 4.4 0.0 1.0 CG A:ARG429 4.4 0.0 1.0 CG A:TYR423 4.5 0.0 1.0 HD2 A:ARG429 4.5 0.0 1.0 HB2 A:TYR438 4.6 0.0 1.0 HB3 A:TYR423 4.6 0.0 1.0 HD2 A:PRO422 4.6 0.0 1.0 NE A:ARG429 4.7 0.0 1.0 HE2 A:TYR423 4.7 0.0 1.0 CA A:CYS421 4.7 0.0 1.0 H A:TYR423 4.7 0.0 1.0 CA A:CYS427 4.7 0.0 1.0 CE2 A:TYR423 4.7 0.0 1.0 HB3 A:TYR438 4.7 0.0 1.0 HA A:CYS427 4.8 0.0 1.0 HG3 A:ARG429 4.8 0.0 1.0 HA A:CYS421 4.9 0.0 1.0 HD1 A:HIS434 4.9 0.0 1.0 HD1 A:HIS440 5.0 0.0 1.0 N A:GLY424 5.0 0.0 1.0

S.Eustermann, C.Brockmann, P.V.Mehrotra, J.C.Yang, D.Loakes, S.C.West, I.Ahel, D.Neuhaus. Solution Structures of the Two Pbz Domains From Human Aplf and Their Interaction with Poly(Adp-Ribose). Nat.Struct.Mol.Biol. V. 17 241 2010.
ISSN: ISSN 1545-9993
PubMed: 20098424
DOI: 10.1038/NSMB.1747