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Zinc in PDB 2kik: An Artificial Di-Iron Oxo-Protein with Phenol Oxidase Activity

Zinc Binding Sites:

The binding sites of Zinc atom in the An Artificial Di-Iron Oxo-Protein with Phenol Oxidase Activity (pdb code 2kik). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the An Artificial Di-Iron Oxo-Protein with Phenol Oxidase Activity, PDB code: 2kik:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2kik

Go back to Zinc Binding Sites List in 2kik
Zinc binding site 1 out of 2 in the An Artificial Di-Iron Oxo-Protein with Phenol Oxidase Activity


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of An Artificial Di-Iron Oxo-Protein with Phenol Oxidase Activity within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn50

b:0.0
occ:1.00
OE2 B:GLU36 1.8 0.0 1.0
OE1 A:GLU36 1.8 0.0 1.0
OE1 A:GLU10 1.8 0.0 1.0
OE2 A:GLU10 1.8 0.0 1.0
ND1 A:HIS39 2.0 0.0 1.0
CD A:GLU10 2.3 0.0 1.0
CD A:GLU36 2.9 0.0 1.0
CD B:GLU36 3.0 0.0 1.0
CE1 A:HIS39 3.0 0.0 1.0
CG A:HIS39 3.0 0.0 1.0
HB3 A:HIS39 3.1 0.0 1.0
HG22 B:ILE32 3.2 0.0 1.0
HA A:GLU36 3.2 0.0 1.0
HE1 A:HIS39 3.2 0.0 1.0
HB2 A:HIS39 3.3 0.0 1.0
CB A:HIS39 3.4 0.0 1.0
OE2 A:GLU36 3.4 0.0 1.0
HG2 A:GLU10 3.5 0.0 1.0
CG A:GLU10 3.5 0.0 1.0
HE1 B:HIS39 3.6 0.0 1.0
HH B:TYR17 3.6 0.0 1.0
OE1 B:GLU36 3.6 0.0 1.0
HG2 B:GLU36 4.0 0.0 1.0
CG B:GLU36 4.1 0.0 1.0
NE2 A:HIS39 4.1 0.0 1.0
CD2 A:HIS39 4.1 0.0 1.0
CA A:GLU36 4.1 0.0 1.0
CG A:GLU36 4.2 0.0 1.0
HG3 A:GLU10 4.2 0.0 1.0
ZN B:ZN50 4.2 0.0 1.0
CG2 B:ILE32 4.2 0.0 1.0
HB3 A:GLU36 4.3 0.0 1.0
HG3 B:GLU36 4.4 0.0 1.0
HB3 A:GLU10 4.4 0.0 1.0
CB A:GLU36 4.4 0.0 1.0
HG23 B:ILE32 4.4 0.0 1.0
CE1 B:HIS39 4.4 0.0 1.0
OH B:TYR17 4.5 0.0 1.0
HE2 B:TYR17 4.5 0.0 1.0
HG21 B:ILE32 4.6 0.0 1.0
CB A:GLU10 4.6 0.0 1.0
ND1 B:HIS39 4.6 0.0 1.0
HG2 A:GLU36 4.7 0.0 1.0
N A:GLU36 4.7 0.0 1.0
HA B:ILE32 4.7 0.0 1.0
CA A:HIS39 4.9 0.0 1.0
HG13 B:ILE32 4.9 0.0 1.0
HG3 A:GLU36 4.9 0.0 1.0

Zinc binding site 2 out of 2 in 2kik

Go back to Zinc Binding Sites List in 2kik
Zinc binding site 2 out of 2 in the An Artificial Di-Iron Oxo-Protein with Phenol Oxidase Activity


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of An Artificial Di-Iron Oxo-Protein with Phenol Oxidase Activity within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn50

b:0.0
occ:1.00
OE1 B:GLU36 1.7 0.0 1.0
OE2 A:GLU36 1.7 0.0 1.0
OE2 B:GLU10 1.8 0.0 1.0
OE1 B:GLU10 1.8 0.0 1.0
CD B:GLU10 2.2 0.0 1.0
ND1 B:HIS39 2.8 0.0 1.0
CD B:GLU36 2.9 0.0 1.0
CD A:GLU36 2.9 0.0 1.0
OE2 B:GLU36 3.3 0.0 1.0
HH A:TYR17 3.4 0.0 1.0
OE1 A:GLU36 3.4 0.0 1.0
HB3 B:HIS39 3.5 0.0 1.0
HA B:GLU36 3.7 0.0 1.0
HB2 B:HIS39 3.7 0.0 1.0
CG B:GLU10 3.7 0.0 1.0
CG B:HIS39 3.8 0.0 1.0
HE2 A:TYR17 3.8 0.0 1.0
CE1 B:HIS39 3.8 0.0 1.0
CB B:HIS39 3.9 0.0 1.0
HE1 B:HIS39 4.0 0.0 1.0
CG A:GLU36 4.1 0.0 1.0
HG3 A:GLU36 4.1 0.0 1.0
CG B:GLU36 4.2 0.0 1.0
ZN A:ZN50 4.2 0.0 1.0
HB3 B:GLU36 4.2 0.0 1.0
HB3 B:GLU10 4.2 0.0 1.0
HG3 B:GLU10 4.2 0.0 1.0
HG2 B:GLU10 4.3 0.0 1.0
HA B:GLU10 4.3 0.0 1.0
OH A:TYR17 4.3 0.0 1.0
HG2 A:GLU36 4.4 0.0 1.0
CB B:GLU10 4.5 0.0 1.0
CB B:GLU36 4.5 0.0 1.0
HG22 A:ILE32 4.5 0.0 1.0
CA B:GLU36 4.6 0.0 1.0
HG3 B:GLU36 4.6 0.0 1.0
CE2 A:TYR17 4.7 0.0 1.0
HG2 A:GLU10 4.8 0.0 1.0
HG2 B:GLU36 4.9 0.0 1.0
CA B:GLU10 4.9 0.0 1.0
CD2 B:HIS39 5.0 0.0 1.0
NE2 B:HIS39 5.0 0.0 1.0

Reference:

M.Faiella, C.Andreozzi, R.Torres, V.Pavone, O.Maglio, F.Nastri, W.F.Degrado, A.Lombardi. An Artificial Di-Iron Oxo-Protein with Phenol Oxidase Activity To Be Published.
Page generated: Thu Oct 17 01:36:06 2024

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