Zinc in PDB 2ies: Crystal Structure of Aquifex Aeolicus Lpxc Complexed with Pyrophosphate

The structure of Crystal Structure of Aquifex Aeolicus Lpxc Complexed with Pyrophosphate, PDB code: 2ies was solved by H.A.Gennadios, D.W.Christianson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 3.10
Space group	P 61
Cell size a, b, c (Å), α, β, γ (°)	98.850, 98.850, 125.660, 90.00, 90.00, 120.00
R / Rfree (%)	23 / 27.7

The structure of Crystal Structure of Aquifex Aeolicus Lpxc Complexed with Pyrophosphate also contains other interesting chemical elements:

Chlorine

(Cl)

2 atoms

The binding sites of Zinc atom in the Crystal Structure of Aquifex Aeolicus Lpxc Complexed with Pyrophosphate (pdb code 2ies). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 5 binding sites of Zinc where determined in the Crystal Structure of Aquifex Aeolicus Lpxc Complexed with Pyrophosphate, PDB code: 2ies:
Jump to Zinc binding site number: 1; 2; 3; 4; 5;

Zinc binding site 1 out of 5 in the Crystal Structure of Aquifex Aeolicus Lpxc Complexed with Pyrophosphate


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Aquifex Aeolicus Lpxc Complexed with Pyrophosphate within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn602 b:26.8 occ:0.60 CL A:CL608 2.3 18.4 0.7

Zinc binding site 2 out of 5 in the Crystal Structure of Aquifex Aeolicus Lpxc Complexed with Pyrophosphate


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of Aquifex Aeolicus Lpxc Complexed with Pyrophosphate within 5.0Å range:

Zinc binding site 3 out of 5 in the Crystal Structure of Aquifex Aeolicus Lpxc Complexed with Pyrophosphate


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Crystal Structure of Aquifex Aeolicus Lpxc Complexed with Pyrophosphate within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn604 b:30.8 occ:0.60 CL A:CL607 2.3 30.0 0.7

Zinc binding site 4 out of 5 in the Crystal Structure of Aquifex Aeolicus Lpxc Complexed with Pyrophosphate


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 4 of Crystal Structure of Aquifex Aeolicus Lpxc Complexed with Pyrophosphate within 5.0Å range:

Zinc binding site 5 out of 5 in the Crystal Structure of Aquifex Aeolicus Lpxc Complexed with Pyrophosphate


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 5 of Crystal Structure of Aquifex Aeolicus Lpxc Complexed with Pyrophosphate within 5.0Å range:

H.A.Gennadios, D.W.Christianson. Binding of Uridine 5-Diphosphate in the Basic Patch of the Zinc Metalloenzyme Deacetylase Lpxc and Implications For Substrate Binding Biochemistry V. 45 15216 2006.
ISSN: ISSN 0006-2960
PubMed: 17176043
DOI: 10.1021/BI0619021