Zinc in PDB 2ff0: Solution Structure of Steroidogenic Factor 1 Dna Binding Domain Bound to Its Target Sequence in the Inhibin Alpha- Subunit Promoter

The binding sites of Zinc atom in the Solution Structure of Steroidogenic Factor 1 Dna Binding Domain Bound to Its Target Sequence in the Inhibin Alpha- Subunit Promoter (pdb code 2ff0). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of Steroidogenic Factor 1 Dna Binding Domain Bound to Its Target Sequence in the Inhibin Alpha- Subunit Promoter, PDB code: 2ff0:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution Structure of Steroidogenic Factor 1 Dna Binding Domain Bound to Its Target Sequence in the Inhibin Alpha- Subunit Promoter


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of Steroidogenic Factor 1 Dna Binding Domain Bound to Its Target Sequence in the Inhibin Alpha- Subunit Promoter within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn1001 b:0.0 occ:1.00 HG A:CYS33 1.1 0.0 1.0 SG A:CYS13 2.2 0.0 1.0 SG A:CYS33 2.2 0.0 1.0 SG A:CYS30 2.2 0.0 1.0 SG A:CYS16 2.2 0.0 1.0 H A:CYS30 2.6 0.0 1.0 HG A:CYS16 2.6 0.0 1.0 HG A:CYS30 2.7 0.0 1.0 HB2 A:ASP18 2.8 0.0 1.0 HB2 A:CYS13 2.9 0.0 1.0 CB A:CYS13 2.9 0.0 1.0 HB3 A:CYS13 3.0 0.0 1.0 HG A:CYS13 3.2 0.0 1.0 H A:CYS33 3.2 0.0 1.0 H A:ASP18 3.3 0.0 1.0 CB A:CYS30 3.5 0.0 1.0 N A:CYS30 3.5 0.0 1.0 HB3 A:CYS30 3.5 0.0 1.0 CB A:CYS33 3.6 0.0 1.0 HB3 A:SER32 3.6 0.0 1.0 HB2 A:CYS33 3.6 0.0 1.0 CB A:ASP18 3.9 0.0 1.0 CB A:CYS16 3.9 0.0 1.0 N A:CYS33 3.9 0.0 1.0 OD2 A:ASP18 3.9 0.0 1.0 H A:CYS16 4.0 0.0 1.0 HG12 A:VAL15 4.0 0.0 1.0 CA A:CYS30 4.0 0.0 1.0 HB A:THR29 4.0 0.0 1.0 H A:GLY17 4.0 0.0 1.0 HA A:THR29 4.1 0.0 1.0 HB3 A:CYS16 4.1 0.0 1.0 N A:ASP18 4.1 0.0 1.0 CA A:CYS33 4.3 0.0 1.0 HB2 A:CYS30 4.3 0.0 1.0 HB3 A:CYS33 4.4 0.0 1.0 CG A:ASP18 4.4 0.0 1.0 CA A:CYS13 4.4 0.0 1.0 HG23 A:THR29 4.4 0.0 1.0 CA A:ASP18 4.5 0.0 1.0 H A:CYS13 4.5 0.0 1.0 HB2 A:CYS16 4.5 0.0 1.0 O A:ASP18 4.5 0.0 1.0 C A:THR29 4.5 0.0 1.0 HA A:CYS33 4.5 0.0 1.0 HB3 A:ASP18 4.6 0.0 1.0 C A:CYS30 4.6 0.0 1.0 O A:CYS30 4.6 0.0 1.0 CB A:SER32 4.6 0.0 1.0 CA A:THR29 4.6 0.0 1.0 N A:GLY17 4.7 0.0 1.0 N A:CYS16 4.7 0.0 1.0 HH21 A:ARG69 4.7 0.0 1.0 CA A:CYS16 4.8 0.0 1.0 CB A:THR29 4.8 0.0 1.0 H A:SER32 4.8 0.0 1.0 C A:ASP18 4.8 0.0 1.0 HA A:CYS13 4.8 0.0 1.0 C A:SER32 4.9 0.0 1.0 N A:CYS13 4.9 0.0 1.0 HA A:CYS30 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the Solution Structure of Steroidogenic Factor 1 Dna Binding Domain Bound to Its Target Sequence in the Inhibin Alpha- Subunit Promoter


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of Steroidogenic Factor 1 Dna Binding Domain Bound to Its Target Sequence in the Inhibin Alpha- Subunit Promoter within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn1002 b:0.0 occ:1.00 HG A:CYS65 1.1 0.0 1.0 HG A:CYS68 1.5 0.0 1.0 SG A:CYS65 2.2 0.0 1.0 SG A:CYS49 2.2 0.0 1.0 SG A:CYS55 2.2 0.0 1.0 SG A:CYS68 2.2 0.0 1.0 HB3 A:CYS65 2.7 0.0 1.0 HG A:CYS49 2.7 0.0 1.0 HG A:CYS55 2.8 0.0 1.0 CB A:CYS65 3.0 0.0 1.0 HB2 A:CYS49 3.2 0.0 1.0 CB A:CYS49 3.3 0.0 1.0 HB2 A:CYS65 3.4 0.0 1.0 HB2 A:CYS55 3.4 0.0 1.0 O A:SER52 3.5 0.0 1.0 CB A:CYS55 3.5 0.0 1.0 CB A:CYS68 3.7 0.0 1.0 HB2 A:CYS68 3.8 0.0 1.0 HB3 A:CYS49 3.8 0.0 1.0 H A:CYS55 3.9 0.0 1.0 HB3 A:CYS68 4.1 0.0 1.0 HB3 A:CYS55 4.2 0.0 1.0 O A:GLU51 4.2 0.0 1.0 HG A:SER52 4.2 0.0 1.0 CA A:CYS65 4.3 0.0 1.0 H A:CYS68 4.4 0.0 1.0 HA A:CYS65 4.4 0.0 1.0 N A:CYS55 4.5 0.0 1.0 HA A:CYS49 4.6 0.0 1.0 CA A:CYS49 4.6 0.0 1.0 HA A:GLN53 4.6 0.0 1.0 CA A:CYS55 4.7 0.0 1.0 C A:SER52 4.7 0.0 1.0 OG A:SER52 4.8 0.0 1.0 CA A:CYS68 4.9 0.0 1.0 HD2 A:PHE67 4.9 0.0 1.0 N A:CYS68 5.0 0.0 1.0

T.H.Little, Y.Zhang, C.K.Matulis, J.Weck, Z.Zhang, A.Ramachandran, K.E.Mayo, I.Radhakrishnan. Sequence-Specific Deoxyribonucleic Acid (Dna) Recognition By Steroidogenic Factor 1: A Helix at the Carboxy Terminus of the Dna Binding Domain Is Necessary For Complex Stability. Mol.Endocrinol. V. 20 831 2006.
ISSN: ISSN 0888-8809
PubMed: 16339274
DOI: 10.1210/ME.2005-0384