Atomistry » Zinc » PDB 2exf-2fa7 » 2f5w
Atomistry »
  Zinc »
    PDB 2exf-2fa7 »
      2f5w »

Zinc in PDB 2f5w: Cross-Linked Barnase Soaked in 3 M Thiourea

Protein crystallography data

The structure of Cross-Linked Barnase Soaked in 3 M Thiourea, PDB code: 2f5w was solved by T.Prange, M.Salem, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 2.00
Space group P 32
Cell size a, b, c (Å), α, β, γ (°) 59.500, 59.500, 81.510, 90.00, 90.00, 120.00
R / Rfree (%) n/a / n/a

Zinc Binding Sites:

The binding sites of Zinc atom in the Cross-Linked Barnase Soaked in 3 M Thiourea (pdb code 2f5w). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cross-Linked Barnase Soaked in 3 M Thiourea, PDB code: 2f5w:

Zinc binding site 1 out of 1 in 2f5w

Go back to Zinc Binding Sites List in 2f5w
Zinc binding site 1 out of 1 in the Cross-Linked Barnase Soaked in 3 M Thiourea


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cross-Linked Barnase Soaked in 3 M Thiourea within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn150

b:76.0
occ:1.00
OE2 C:GLU58 2.4 61.1 1.0
OE1 C:GLU58 2.4 74.2 1.0
CD C:GLU58 2.7 53.6 1.0
NZ C:LYS60 3.1 25.6 1.0
CE C:LYS60 4.0 31.1 1.0
CG C:GLU58 4.2 37.8 1.0
O C:HOH284 4.3 42.2 1.0
O C:TYR101 4.3 18.3 1.0
CA C:GLN102 4.8 19.9 1.0
CG C:GLN102 4.9 34.6 1.0

Reference:

M.Salem, Y.Mauguen, T.Prange. On the Edge of the Denaturation Process: Application of X-Ray Diffraction to Barnase and Lysozyme Cross-Linked Crystals with Denaturants in Molar Concentrations. Biochim.Biophys.Acta V.1764 903 2006.
ISSN: ISSN 0006-3002
PubMed: 16600702
DOI: 10.1016/J.BBAPAP.2006.02.009
Page generated: Wed Oct 16 23:39:26 2024

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy