Zinc in PDB 2epa: Solution Structure of the First and Second Zf-C2H2 Domains From Human Krueppel-Like Factor 10

The binding sites of Zinc atom in the Solution Structure of the First and Second Zf-C2H2 Domains From Human Krueppel-Like Factor 10 (pdb code 2epa). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the First and Second Zf-C2H2 Domains From Human Krueppel-Like Factor 10, PDB code: 2epa:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Solution Structure of the First and Second Zf-C2H2 Domains From Human Krueppel-Like Factor 10


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the First and Second Zf-C2H2 Domains From Human Krueppel-Like Factor 10 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn300 b:0.0 occ:1.00 NE2 A:HIS38 2.0 0.0 1.0 NE2 A:HIS42 2.1 0.0 1.0 SG A:CYS20 2.3 0.0 1.0 SG A:CYS25 2.3 0.0 1.0 CD2 A:HIS42 2.9 0.0 1.0 CE1 A:HIS38 3.0 0.0 1.0 HD2 A:HIS42 3.0 0.0 1.0 CD2 A:HIS38 3.1 0.0 1.0 HE1 A:HIS38 3.1 0.0 1.0 CE1 A:HIS42 3.1 0.0 1.0 CB A:CYS25 3.2 0.0 1.0 HB2 A:CYS25 3.2 0.0 1.0 HB2 A:CYS20 3.3 0.0 1.0 HB3 A:CYS25 3.3 0.0 1.0 HD2 A:HIS38 3.4 0.0 1.0 CB A:CYS20 3.4 0.0 1.0 HB3 A:HIS22 3.4 0.0 1.0 HE1 A:HIS42 3.5 0.0 1.0 HB2 A:LYS27 3.6 0.0 1.0 HB3 A:CYS20 3.7 0.0 1.0 HD3 A:LYS27 3.9 0.0 1.0 CG A:HIS42 4.1 0.0 1.0 ND1 A:HIS38 4.1 0.0 1.0 ND1 A:HIS42 4.2 0.0 1.0 CG A:HIS38 4.2 0.0 1.0 CB A:HIS22 4.4 0.0 1.0 HB2 A:HIS22 4.4 0.0 1.0 HD2 A:HIS22 4.6 0.0 1.0 CB A:LYS27 4.6 0.0 1.0 CA A:CYS25 4.7 0.0 1.0 H A:LYS27 4.7 0.0 1.0 CA A:CYS20 4.7 0.0 1.0 HB3 A:LYS27 4.8 0.0 1.0 H A:HIS22 4.8 0.0 1.0 HA A:CYS20 4.9 0.0 1.0 CD A:LYS27 4.9 0.0 1.0 HA A:CYS25 4.9 0.0 1.0 HA A:THR39 4.9 0.0 1.0 HD1 A:HIS38 5.0 0.0 1.0 HG22 A:THR41 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the Solution Structure of the First and Second Zf-C2H2 Domains From Human Krueppel-Like Factor 10


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the First and Second Zf-C2H2 Domains From Human Krueppel-Like Factor 10 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn400 b:0.0 occ:1.00 NE2 A:HIS72 2.0 0.0 1.0 NE2 A:HIS68 2.0 0.0 1.0 SG A:CYS50 2.3 0.0 1.0 SG A:CYS55 2.3 0.0 1.0 CD2 A:HIS72 2.9 0.0 1.0 CD2 A:HIS68 3.0 0.0 1.0 HD2 A:HIS72 3.0 0.0 1.0 CE1 A:HIS68 3.1 0.0 1.0 CE1 A:HIS72 3.1 0.0 1.0 HD2 A:HIS68 3.2 0.0 1.0 HE1 A:HIS68 3.3 0.0 1.0 HB2 A:CYS55 3.3 0.0 1.0 CB A:CYS55 3.4 0.0 1.0 CB A:CYS50 3.4 0.0 1.0 HB2 A:CYS50 3.4 0.0 1.0 HB2 A:ARG57 3.4 0.0 1.0 HE1 A:HIS72 3.5 0.0 1.0 HB3 A:CYS55 3.5 0.0 1.0 HB3 A:CYS50 3.6 0.0 1.0 HB2 A:TRP52 3.8 0.0 1.0 HD3 A:ARG69 3.8 0.0 1.0 HB3 A:TRP52 4.1 0.0 1.0 CG A:HIS72 4.1 0.0 1.0 CG A:HIS68 4.1 0.0 1.0 ND1 A:HIS68 4.2 0.0 1.0 ND1 A:HIS72 4.2 0.0 1.0 HE1 A:PHE59 4.3 0.0 1.0 CB A:TRP52 4.4 0.0 1.0 H A:ARG57 4.5 0.0 1.0 CB A:ARG57 4.5 0.0 1.0 HG3 A:ARG57 4.5 0.0 1.0 CD A:ARG69 4.6 0.0 1.0 HD2 A:ARG69 4.6 0.0 1.0 HZ A:PHE59 4.7 0.0 1.0 HA A:ARG69 4.8 0.0 1.0 CA A:CYS55 4.8 0.0 1.0 H A:TRP52 4.8 0.0 1.0 CA A:CYS50 4.8 0.0 1.0 O A:ARG57 4.8 0.0 1.0 HE A:ARG69 4.9 0.0 1.0 HB3 A:ARG57 5.0 0.0 1.0 HA A:CYS50 5.0 0.0 1.0 NE A:ARG69 5.0 0.0 1.0

K.Izumi, F.Hayashi, M.Yoshida, S.Yokoyama. Solution Structure of the First and Second Zf-C2H2 Domains From Human Krueppel-Like Factor 10 To Be Published.