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Zinc in PDB 2cot: Solution Structure of the First and Second Zf-C2H2 Domain of Zinc Finger Protein 435

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the First and Second Zf-C2H2 Domain of Zinc Finger Protein 435 (pdb code 2cot). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the First and Second Zf-C2H2 Domain of Zinc Finger Protein 435, PDB code: 2cot:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 2cot

Go back to Zinc Binding Sites List in 2cot
Zinc binding site 1 out of 2 in the Solution Structure of the First and Second Zf-C2H2 Domain of Zinc Finger Protein 435


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the First and Second Zf-C2H2 Domain of Zinc Finger Protein 435 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
NE2 A:HIS37 2.1 0.0 1.0
NE2 A:HIS41 2.1 0.0 1.0
SG A:CYS21 2.3 0.0 1.0
SG A:CYS24 2.3 0.0 1.0
H A:CYS24 2.6 0.0 1.0
CD2 A:HIS41 2.6 0.0 1.0
HD2 A:HIS41 2.7 0.0 1.0
CE1 A:HIS37 2.7 0.0 1.0
HB2 A:GLU23 2.8 0.0 1.0
HE1 A:HIS37 2.8 0.0 1.0
HB3 A:CYS21 2.9 0.0 1.0
CB A:CYS21 3.1 0.0 1.0
CE1 A:HIS41 3.2 0.0 1.0
CD2 A:HIS37 3.2 0.0 1.0
HB3 A:CYS24 3.4 0.0 1.0
HB2 A:CYS21 3.4 0.0 1.0
CB A:CYS24 3.4 0.0 1.0
N A:CYS24 3.4 0.0 1.0
HD2 A:HIS37 3.6 0.0 1.0
HE1 A:HIS41 3.7 0.0 1.0
H A:GLY25 3.7 0.0 1.0
CG A:HIS41 3.8 0.0 1.0
CB A:GLU23 3.8 0.0 1.0
ND1 A:HIS37 3.9 0.0 1.0
ND1 A:HIS41 4.0 0.0 1.0
CA A:CYS24 4.0 0.0 1.0
HA A:ARG38 4.1 0.0 1.0
HB3 A:GLU23 4.1 0.0 1.0
H A:GLU23 4.2 0.0 1.0
CG A:HIS37 4.2 0.0 1.0
HB2 A:CYS24 4.4 0.0 1.0
C A:GLU23 4.4 0.0 1.0
H A:LYS26 4.4 0.0 1.0
HB2 A:LYS26 4.4 0.0 1.0
CA A:GLU23 4.5 0.0 1.0
HG22 A:THR40 4.5 0.0 1.0
CA A:CYS21 4.5 0.0 1.0
N A:GLU23 4.5 0.0 1.0
HG23 A:THR40 4.6 0.0 1.0
N A:GLY25 4.6 0.0 1.0
HG3 A:ARG38 4.6 0.0 1.0
HG3 A:GLU23 4.7 0.0 1.0
HD1 A:HIS37 4.7 0.0 1.0
CG A:GLU23 4.7 0.0 1.0
HG21 A:THR40 4.7 0.0 1.0
HG2 A:GLU23 4.8 0.0 1.0
HD2 A:LYS26 4.8 0.0 1.0
CG2 A:THR40 4.8 0.0 1.0
HA A:CYS24 4.9 0.0 1.0
C A:CYS21 4.9 0.0 1.0
C A:CYS24 4.9 0.0 1.0
HD1 A:HIS41 4.9 0.0 1.0

Zinc binding site 2 out of 2 in 2cot

Go back to Zinc Binding Sites List in 2cot
Zinc binding site 2 out of 2 in the Solution Structure of the First and Second Zf-C2H2 Domain of Zinc Finger Protein 435


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the First and Second Zf-C2H2 Domain of Zinc Finger Protein 435 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.0
occ:1.00
NE2 A:HIS65 2.1 0.0 1.0
NE2 A:HIS69 2.1 0.0 1.0
SG A:CYS52 2.4 0.0 1.0
SG A:CYS49 2.4 0.0 1.0
H A:CYS52 2.6 0.0 1.0
CE1 A:HIS65 2.7 0.0 1.0
HE1 A:HIS65 2.7 0.0 1.0
HB3 A:CYS52 2.7 0.0 1.0
CD2 A:HIS69 2.8 0.0 1.0
HD2 A:HIS69 2.8 0.0 1.0
CB A:CYS52 3.0 0.0 1.0
HB3 A:CYS49 3.1 0.0 1.0
CB A:CYS49 3.2 0.0 1.0
CE1 A:HIS69 3.2 0.0 1.0
HB2 A:GLU51 3.3 0.0 1.0
CD2 A:HIS65 3.3 0.0 1.0
HB2 A:CYS49 3.4 0.0 1.0
N A:CYS52 3.4 0.0 1.0
HG23 A:VAL68 3.6 0.0 1.0
HE1 A:HIS69 3.6 0.0 1.0
HD2 A:HIS65 3.7 0.0 1.0
CA A:CYS52 3.8 0.0 1.0
H A:GLY53 3.8 0.0 1.0
ND1 A:HIS65 3.9 0.0 1.0
HB2 A:CYS52 4.0 0.0 1.0
CG A:HIS69 4.0 0.0 1.0
HG21 A:VAL68 4.1 0.0 1.0
ND1 A:HIS69 4.2 0.0 1.0
CG2 A:VAL68 4.2 0.0 1.0
CG A:HIS65 4.2 0.0 1.0
HZ A:PHE56 4.2 0.0 1.0
HG22 A:VAL68 4.2 0.0 1.0
CB A:GLU51 4.3 0.0 1.0
H A:GLU51 4.5 0.0 1.0
C A:GLU51 4.5 0.0 1.0
H A:LYS54 4.5 0.0 1.0
N A:GLY53 4.6 0.0 1.0
HB3 A:GLU51 4.6 0.0 1.0
HA A:CYS52 4.6 0.0 1.0
CA A:CYS49 4.6 0.0 1.0
C A:CYS52 4.7 0.0 1.0
HD1 A:HIS65 4.7 0.0 1.0
N A:GLU51 4.7 0.0 1.0
HA A:HIS66 4.7 0.0 1.0
H A:ASP50 4.7 0.0 1.0
CA A:GLU51 4.8 0.0 1.0
HE1 A:PHE56 4.8 0.0 1.0

Reference:

X.R.Qin, T.Nagashima, F.Hayashi, S.Yokoyama. Solution Structure of the First and Second Zf-C2H2 Domain of Zinc Finger Protein 435 To Be Published.
Page generated: Wed Oct 16 22:27:58 2024

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