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Zinc in PDB, part 555 (files: 22161-22200), PDB 9cmq-9dg3

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 22161-22200 (PDB 9cmq-9dg3).
  1. 9cmq (Zn: 4) - Horse Liver Alcohol Dehydrogenase V203A in Complex with Nadh and N- Cylcohexyl Formamide
  2. 9cnx (Zn: 1) - Cryoem Structure of Bam in Complex with the PTB1 Closed-State Inhibitor (in Ddm Detergent)
  3. 9cp7 (Zn: 2) - Crystal Structure of Dhps-3-Dehydrogenase, Hpsn From Cupriavidus Pinatubonensis in Complex with Product Analogue (L-Cysteate) and Nadh
  4. 9cp8 (Zn: 2) - Crystal Structure of Dhps-3-Dehydrogenase, Hpsn From Cupriavidus Pinatubonensis in Complex with Product (R-Sulfolactate) and Nadh
  5. 9cpo (Zn: 2) - Infectious Bronchitis Virus Core Polymerase Complex
  6. 9cqk (Zn: 4) - Horse Liver Alcohol Dehydrogenase F93W in Complex with Nadh and N- Cylcohexyl Formamide
  7. 9cre (Zn: 1) - Cryo-Em Structure of Sars-Cov-2 Spike Proteins on Intact Virions: Alpha (B.1.1.7) Variant 3 Closed Rbds
  8. 9csj (Zn: 5) - Crystal Structure of Human Glyoxalase Domain-Containing Protein 4 (GLOD4) at 2.33 A Resolution.
    Other atoms: Mg (3); Cl (12);
  9. 9csm (Zn: 4) - Crystal Structure of Human Ribonuclease 7 (Rnase 7, HSR7)
    Other atoms: Cl (11);
  10. 9csx (Zn: 4) - Matrix Metalloproteinase-10 Proenzyme
    Other atoms: Ca (4);
  11. 9cv1 (Zn: 2) - Crystal Structure of the Metallo-Beta-Lactamase Vim-15 with L- Captopril
    Other atoms: Mg (1);
  12. 9cv2 (Zn: 3) - Crystal Structure of the Metallo-Beta-Lactamase Vim-20 with D- Captopril
  13. 9cv3 (Zn: 3) - Crystal Structure of the Metallo-Beta-Lactamase Vim-20 with L- Captopril
  14. 9cv4 (Zn: 3) - Crystal Structure of the Metallo-Beta-Lactamase Vim-31 with D- Captopril
  15. 9cv5 (Zn: 2) - Crystal Structure of the Metallo-Beta-Lactamase Vim-31 with L- Captopril
    Other atoms: Mg (1);
  16. 9cvi (Zn: 1) - Structure of Rat Neuronal Nitric Oxide Synthase R349A Mutant Heme Domain Bound with 4-Methyl-6-(3-((Methylamino)Methyl)Phenyl)Pyridin- 2-Amine Dihydrochloride
    Other atoms: Fe (1);
  17. 9cvs (Zn: 2) - Structure of Human Neuronal Nitric Oxide Synthase R354A/G357D Mutant Heme Domain Bound with 4-Methyl-6-(3-((Methylamino)Methyl)Phenyl) Pyridin-2-Amine Dihydrochloride
    Other atoms: Fe (4);
  18. 9cw2 (Zn: 2) - Structure of Human Endothelial Nitric Oxide Synthase Heme Domain Bound with 4-Methyl-6-(3-((Methylamino)Methyl)Phenyl)Pyridin-2-Amine Dihydrochloride
    Other atoms: Gd (4); Fe (4); Cl (4);
  19. 9cxg (Zn: 2) - Structure of PDE6C in Complex with Inhibitory Cone P Gamma in the Presence of Cgmp
    Other atoms: Mg (2);
  20. 9cxh (Zn: 2) - Structure of PDE6C in Complex with the Rod Inhibitory P Gamma Subunit in the Presence of Cgmp
    Other atoms: Mg (2);
  21. 9cxi (Zn: 2) - Structure of PDE6C in Complex with the Rod Inhibitory P Gamma Subunit in the Absence of Added Cgmp
    Other atoms: Mg (2);
  22. 9cxj (Zn: 2) - Structure of PDE6C in Complex with the Rod Inhibitory P Gamma Subunit with Disordered Gafa Region
    Other atoms: Mg (2);
  23. 9d0p (Zn: 1) - Crystal Structure of PLK1 in Complex with AZD1775
  24. 9d32 (Zn: 1) - Structure of the HKU5 Rbd Bound to the P. Abramus ACE2 Receptor
  25. 9d5j (Zn: 2) - Human Adenosine Deaminase Acting on Dsrna (ADAR2-Rd) Bound to Dsrna Containing Deoxyinosine at the -1 Position of the Guide Strand
  26. 9d60 (Zn: 1) - Crystal Structure of Zn(II)-Bound Polysaccharide Deacetylase From Bacteroides Ovatus
  27. 9d89 (Zn: 1) - E. Coli 50S Ribosomal Subunit in Complex with Pramp Rumicidin-2 (Focused Refinement)
    Other atoms: Mg (204); K (93);
  28. 9d9z (Zn: 20) - Structure of Human UBR4-KCMF1-Cam E3 Ligase Complex (Silencing Factor of the Integrated Stress Response, Sifi)
    Other atoms: Ca (4);
  29. 9dak (Zn: 1) - Merbecovirus PNNL2018B Spike Glycoprotein Rbd Bound to the P. Nathusii ACE2
  30. 9daz (Zn: 2) - Molecular Basis of Pathogenicity of the Recently Emerged Fcov-23 Coronavirus. Complex of Fapn with Fcov-23 Rbd
  31. 9dbd (Zn: 1) - Zn-Bound Structure of A Single-Chain TET4 Variant with An H38E Mutation
  32. 9dbf (Zn: 1) - Zn-Bound Structure of A Single-Chain TET4 Variant with An L42W Mutation
  33. 9dby (Zn: 5) - NCPRC1RYBP Bound to Singly Modified H2AK119UB Nucleosome
  34. 9dch (Zn: 14) - Single-Stranded Rna-Mediated PRC2 Dimer
  35. 9dco (Zn: 1) - Crystal Structure of Epoxyqueuosine Reductase Queh D13N Mutant From Thermotoga Maritima
    Other atoms: Cl (1); Fe (4);
  36. 9ddd (Zn: 2) - Sufs-Sufu Complex From Mycobacterium Tuberculosis
  37. 9dde (Zn: 5) - NCPRC1RYBP Bound to H2AK119UB/H1.4 Chromatosome
  38. 9de2 (Zn: 40) - ETO2 Mynd Bound to Mppl Peptide From GATAD2A
  39. 9deu (Zn: 1) - Crystal Structure of Epoxyqueuosine Reductase Queh in Complex with Queuosine
    Other atoms: Fe (4); Cl (1);
  40. 9dg3 (Zn: 1) - NCPRC1RYBP Delta-Linker Mutant Bound to Singly Modified H2AK119UB Nucleosome
Page generated: Mon Dec 15 11:45:33 2025

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