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Zinc in PDB, part 505 (files: 20161-20200), PDB 8e7q-8ehf

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 20161-20200 (PDB 8e7q-8ehf).
  1. 8e7q (Zn: 2) - Crystal Structure of Fosb From Bacillus Cereus with Zinc and 2- Phosphonopropionic Acid
    Other atoms: Mg (2);
  2. 8e7r (Zn: 2) - Crystal Structure of Fosb From Bacillus Cereus with Zinc and Phosphonoacetate
    Other atoms: Mg (2);
  3. 8e7u (Zn: 4) - F93A Horse Liver Alcohol Dehydrogenase in Complex with Nadh and N- Cyclohexylformamide
  4. 8e82 (Zn: 2) - Mycobacterium Tuberculosis Rnap Elongation Complex with Nusg Transcription Factor
    Other atoms: Mg (1);
  5. 8e8m (Zn: 2) - Mycobacterium Tuberculosis Rnap Paused Elongation Complex
    Other atoms: Mg (1);
  6. 8e95 (Zn: 2) - Mycobacterium Tuberculosis Rnap Elongation Complex
    Other atoms: Mg (1);
  7. 8e9e (Zn: 1) - Rat Protein Farnesyltransferase in Complex with Fpp and Inhibitor 2F
    Other atoms: F (3); Br (1);
  8. 8e9g (Zn: 1) - Mycobacterial Respiratory Complex I with Both Quinone Positions Modelled
    Other atoms: Fe (32);
  9. 8e9h (Zn: 1) - Mycobacterial Respiratory Complex I, Fully-Inserted Quinone
    Other atoms: Fe (32);
  10. 8e9i (Zn: 1) - Mycobacterial Respiratory Complex I, Semi-Inserted Quinone
    Other atoms: Fe (32);
  11. 8eae (Zn: 2) - Structure of Ternary Complex of Cgas with Dsdna and Bound 5-Pppg(2,5) Pi
    Other atoms: Mg (2);
  12. 8ear (Zn: 4) - Structure of the Full-Length IP3R1 Channel Determined in the Presence of Calcium/IP3/Atp
    Other atoms: Ca (16);
  13. 8eaz (Zn: 14) - Hoil-1/E2-Ub/Ub Transthiolation Complex
  14. 8eb0 (Zn: 7) - RNF216/E2-Ub/Ub Transthiolation Complex
  15. 8eb5 (Zn: 1) - Tandem of Hermes Transposase Bed Domain in Complex with the Quasi Palindrome of Its Transposon Left-End
  16. 8ebs (Zn: 5) - Initial Dna-Lesion (CY5) Binding By Xpc and Tfiih
    Other atoms: Ca (2); Fe (4);
  17. 8ebt (Zn: 6) - Xpa Repositioning CORE7 of Tfiih Relative to Xpc-Dna Lesion (CY5)
    Other atoms: Ca (2); Fe (4);
  18. 8ebu (Zn: 6) - Xpc Release From CORE7-Xpa-Dna (CY5)
    Other atoms: Fe (4);
  19. 8ebv (Zn: 5) - Initial Dna-Lesion (Ap) Binding By Xpc and Tfiih Complex 1
    Other atoms: Ca (2); Fe (4);
  20. 8ebw (Zn: 5) - Initial Dna-Lesion (Ap) Binding By Xpc and Tfiih COMPLEX2
    Other atoms: Ca (2); Fe (4);
  21. 8ebx (Zn: 6) - Xpa Repositioning CORE7 of Tfiih Relative to Xpc-Dna Lesion (Ap)
    Other atoms: Fe (4); Ca (2);
  22. 8eby (Zn: 6) - Xpc Release From CORE7-Xpa-Dna (Ap)
    Other atoms: Fe (4);
  23. 8ecc (Zn: 2) - Structure of Ternary Complex of Cgas with Dsdna and Bound 5-Pppi(2,5) Pa
    Other atoms: Mg (2);
  24. 8ecs (Zn: 4) - F93G Horse Liver Alcohol Dehydrogenase in Complex with Nadh and N- Cyclohexylformamide
  25. 8ect (Zn: 4) - F93AL57A Horse Liver Alcohol Dehydrogenase in Complex with Nadh and N- Cyclohexylformamide
  26. 8ecu (Zn: 4) - F93S Horse Liver Alcohol Dehydrogenase in Complex with Nadh and N- Cyclohexylformamide
  27. 8edd (Zn: 1) - Staphylococcus Aureus Endonuclease IV Y33F Mutant
    Other atoms: Fe (2); Cl (3);
  28. 8edg (Zn: 6) - Cryo-Em Structure of the Hermes Transposase Bound to Two Left-Ends of Its Dna Transposon
  29. 8edj (Zn: 2) - Crystal Structure of RA3G-Ssrna-Ga
  30. 8ee3 (Zn: 4) - F93Y Horse Liver Alcohol Dehydrogenase in Complex with Nadh and N- Cyclohexylformamide
  31. 8eex (Zn: 4) - CAS7-11 in Complex with CSX29
  32. 8ef0 (Zn: 3) - Crystal Structure of A Nhp Anti-Zikv Neutralizing Antibody RHMZ104-D
  33. 8efg (Zn: 3) - Crystal Structure of Human TATDN1 Bound to Damp and Two Zinc Ions
    Other atoms: Na (1);
  34. 8eg7 (Zn: 2) - Cryo-Em Structure of Pre-Consensus Elemental Paused Elongation Complex
    Other atoms: Mg (1);
  35. 8eg8 (Zn: 2) - Cryo-Em Structure of Consensus Elemental Paused Elongation Complex with A Folded Tl
    Other atoms: Mg (1);
  36. 8egb (Zn: 2) - Cryo-Em Structure of Consensus Elemental Paused Elongation Complex with An Unfolded Tl
    Other atoms: Mg (1);
  37. 8eh8 (Zn: 2) - Cryo-Em Structure of His-Elemental Paused Elongation Complex with A Folded Tl and A Rotated Rh-Fl (1)
    Other atoms: Mg (1);
  38. 8eh9 (Zn: 2) - Cryo-Em Structure of His-Elemental Paused Elongation Complex with A Folded Tl and A Rotated Rh-Fl (2)
    Other atoms: Mg (1);
  39. 8eha (Zn: 2) - Cryo-Em Structure of His-Elemental Paused Elongation Complex with A Folded Tl and A Rotated Rh-Fl (Out)
    Other atoms: Mg (1);
  40. 8ehf (Zn: 2) - Cryo-Em Structure of His-Elemental Paused Elongation Complex with An Unfolded Tl (1)
    Other atoms: Mg (1);
Page generated: Mon Dec 15 11:43:38 2025

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