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Zinc in PDB 1zat: Crystal Structure of An Enterococcus Faecium Peptidoglycan Binding Protein at 2.4 A Resolution

Protein crystallography data

The structure of Crystal Structure of An Enterococcus Faecium Peptidoglycan Binding Protein at 2.4 A Resolution, PDB code: 1zat was solved by S.Biarrotte-Sorin, J.-E.Hugonnet, J.-L.Mainardi, L.Gutmann, L.Rice, M.Arthur, C.Mayer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 21.92 / 2.40
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 115.976, 115.976, 68.275, 90.00, 90.00, 120.00
R / Rfree (%) 22 / 25.7

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of An Enterococcus Faecium Peptidoglycan Binding Protein at 2.4 A Resolution (pdb code 1zat). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of An Enterococcus Faecium Peptidoglycan Binding Protein at 2.4 A Resolution, PDB code: 1zat:

Zinc binding site 1 out of 1 in 1zat

Go back to Zinc Binding Sites List in 1zat
Zinc binding site 1 out of 1 in the Crystal Structure of An Enterococcus Faecium Peptidoglycan Binding Protein at 2.4 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of An Enterococcus Faecium Peptidoglycan Binding Protein at 2.4 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn467

b:0.5
occ:1.00
OG A:SER439 3.1 74.0 1.0
NE2 A:HIS421 3.5 55.7 1.0
CE1 A:HIS421 3.9 56.7 1.0
OD1 A:ASN444 4.0 59.8 1.0
N A:HIS440 4.2 67.6 1.0
ND1 A:HIS440 4.2 73.0 1.0
CZ2 A:TRP425 4.3 83.5 1.0
CB A:SER439 4.3 70.7 1.0
CB A:CYS442 4.3 55.3 1.0
CB A:HIS440 4.6 69.6 1.0
CD2 A:HIS421 4.7 56.8 1.0
SG A:CYS442 4.7 59.6 1.0
CA A:SER439 4.8 70.3 1.0
CG A:HIS440 4.9 71.7 1.0
CG A:ASN444 4.9 59.1 1.0
ND2 A:ASN444 5.0 60.3 1.0

Reference:

S.Biarrotte-Sorin, J.E.Hugonnet, V.Delfosse, J.L.Mainardi, L.Gutmann, M.Arthur, C.Mayer. Crystal Structure of A Novel Beta-Lactam-Insensitive Peptidoglycan Transpeptidase. J.Mol.Biol. V. 359 533 2006.
ISSN: ISSN 0022-2836
PubMed: 16647082
DOI: 10.1016/J.JMB.2006.03.014
Page generated: Wed Oct 16 21:11:53 2024

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