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Zinc in PDB 1xwh: uc(Nmr) Structure of the First Phd Finger of Autoimmune Regulator Protein (AIRE1): Insights Into Apeced

Zinc Binding Sites:

The binding sites of Zinc atom in the uc(Nmr) Structure of the First Phd Finger of Autoimmune Regulator Protein (AIRE1): Insights Into Apeced (pdb code 1xwh). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the uc(Nmr) Structure of the First Phd Finger of Autoimmune Regulator Protein (AIRE1): Insights Into Apeced, PDB code: 1xwh:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 1xwh

Go back to Zinc Binding Sites List in 1xwh
Zinc binding site 1 out of 2 in the uc(Nmr) Structure of the First Phd Finger of Autoimmune Regulator Protein (AIRE1): Insights Into Apeced


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of uc(Nmr) Structure of the First Phd Finger of Autoimmune Regulator Protein (AIRE1): Insights Into Apeced within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn355

b:0.0
occ:1.00
HB A:VAL301 2.1 0.0 1.0
H A:CYS302 2.4 0.0 1.0
ND1 A:HIS319 2.5 0.0 1.0
SG A:CYS302 2.5 0.0 1.0
SG A:CYS322 2.5 0.0 1.0
SG A:CYS299 2.5 0.0 1.0
HB2 A:HIS319 2.9 0.0 1.0
CB A:VAL301 3.2 0.0 1.0
N A:CYS302 3.2 0.0 1.0
CG A:HIS319 3.4 0.0 1.0
CE1 A:HIS319 3.4 0.0 1.0
CB A:CYS322 3.5 0.0 1.0
HB2 A:CYS322 3.5 0.0 1.0
H A:HIS319 3.5 0.0 1.0
CB A:CYS302 3.6 0.0 1.0
HB3 A:CYS322 3.6 0.0 1.0
HB3 A:CYS302 3.6 0.0 1.0
HE1 A:HIS319 3.6 0.0 1.0
CB A:HIS319 3.6 0.0 1.0
H A:VAL301 3.7 0.0 1.0
HG11 A:VAL301 3.7 0.0 1.0
HG13 A:VAL301 3.8 0.0 1.0
CG1 A:VAL301 3.8 0.0 1.0
HG22 A:VAL301 3.9 0.0 1.0
CA A:CYS302 4.0 0.0 1.0
CB A:CYS299 4.0 0.0 1.0
C A:VAL301 4.0 0.0 1.0
CG2 A:VAL301 4.0 0.0 1.0
CA A:VAL301 4.0 0.0 1.0
HG21 A:VAL301 4.0 0.0 1.0
HB3 A:CYS299 4.1 0.0 1.0
N A:HIS319 4.2 0.0 1.0
HB2 A:CYS299 4.2 0.0 1.0
N A:VAL301 4.2 0.0 1.0
H A:ASP304 4.3 0.0 1.0
HB3 A:HIS319 4.4 0.0 1.0
H A:ARG303 4.4 0.0 1.0
HB2 A:ASP304 4.5 0.0 1.0
HA A:PHE318 4.5 0.0 1.0
HB2 A:CYS302 4.5 0.0 1.0
CA A:HIS319 4.5 0.0 1.0
CD2 A:HIS319 4.6 0.0 1.0
NE2 A:HIS319 4.6 0.0 1.0
C A:CYS302 4.7 0.0 1.0
H A:ALA300 4.8 0.0 1.0
HA A:CYS302 4.8 0.0 1.0
HG12 A:VAL301 4.9 0.0 1.0
N A:ARG303 4.9 0.0 1.0
CA A:CYS322 4.9 0.0 1.0
HA A:VAL301 5.0 0.0 1.0
HG23 A:VAL301 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 1xwh

Go back to Zinc Binding Sites List in 1xwh
Zinc binding site 2 out of 2 in the uc(Nmr) Structure of the First Phd Finger of Autoimmune Regulator Protein (AIRE1): Insights Into Apeced


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of uc(Nmr) Structure of the First Phd Finger of Autoimmune Regulator Protein (AIRE1): Insights Into Apeced within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn356

b:0.0
occ:1.00
HB2 A:CYS314 1.9 0.0 1.0
SG A:CYS314 2.4 0.0 1.0
SG A:CYS311 2.4 0.0 1.0
SG A:CYS340 2.4 0.0 1.0
SG A:CYS337 2.4 0.0 1.0
CB A:CYS314 2.6 0.0 1.0
HB3 A:CYS311 2.9 0.0 1.0
H A:CYS337 3.0 0.0 1.0
CB A:CYS311 3.2 0.0 1.0
HB3 A:CYS314 3.2 0.0 1.0
HB2 A:CYS311 3.4 0.0 1.0
H A:CYS340 3.4 0.0 1.0
HB2 A:SER339 3.5 0.0 1.0
H A:CYS314 3.5 0.0 1.0
CB A:CYS337 3.7 0.0 1.0
HB3 A:CYS337 3.7 0.0 1.0
CA A:CYS314 3.7 0.0 1.0
N A:CYS314 3.7 0.0 1.0
N A:CYS337 3.8 0.0 1.0
CB A:CYS340 3.9 0.0 1.0
HH21 A:ARG316 3.9 0.0 1.0
HB2 A:CYS340 3.9 0.0 1.0
N A:CYS340 4.1 0.0 1.0
HA A:ARG336 4.2 0.0 1.0
CA A:CYS337 4.3 0.0 1.0
HA A:CYS314 4.4 0.0 1.0
CA A:CYS340 4.5 0.0 1.0
CB A:SER339 4.6 0.0 1.0
HB2 A:CYS337 4.6 0.0 1.0
CA A:CYS311 4.6 0.0 1.0
C A:GLY313 4.6 0.0 1.0
H A:GLY313 4.6 0.0 1.0
HA A:CYS340 4.7 0.0 1.0
HB3 A:CYS340 4.7 0.0 1.0
O A:CYS314 4.7 0.0 1.0
C A:CYS314 4.7 0.0 1.0
HE A:ARG316 4.8 0.0 1.0
HE2 A:PHE318 4.8 0.0 1.0
C A:CYS337 4.9 0.0 1.0
NH2 A:ARG316 4.9 0.0 1.0
C A:ARG336 4.9 0.0 1.0
HB3 A:SER339 4.9 0.0 1.0
C A:CYS311 5.0 0.0 1.0
H A:SER339 5.0 0.0 1.0
O A:CYS337 5.0 0.0 1.0
N A:GLY313 5.0 0.0 1.0

Reference:

M.J.Bottomley, G.Stier, D.Pennacchini, G.Legube, B.Simon, A.Akhtar, M.Sattler, G.Musco. uc(Nmr) Structure of the First Phd Finger of Autoimmune Regulator Protein (AIRE1). Insights Into Autoimmune Polyendocrinopathy-Candidiasis-Ectodermal Dystrophy (Apeced) Disease J.Biol.Chem. V. 280 11505 2005.
ISSN: ISSN 0021-9258
PubMed: 15649886
DOI: 10.1074/JBC.M413959200
Page generated: Wed Oct 16 20:38:52 2024

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