Atomistry » Zinc » PDB 1wwe-1x8g » 1x6h
Atomistry »
  Zinc »
    PDB 1wwe-1x8g »
      1x6h »

Zinc in PDB 1x6h: Solution Structures of the C2H2 Type Zinc Finger Domain of Human Transcriptional Repressor Ctcf

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structures of the C2H2 Type Zinc Finger Domain of Human Transcriptional Repressor Ctcf (pdb code 1x6h). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structures of the C2H2 Type Zinc Finger Domain of Human Transcriptional Repressor Ctcf, PDB code: 1x6h:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 1x6h

Go back to Zinc Binding Sites List in 1x6h
Zinc binding site 1 out of 2 in the Solution Structures of the C2H2 Type Zinc Finger Domain of Human Transcriptional Repressor Ctcf


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structures of the C2H2 Type Zinc Finger Domain of Human Transcriptional Repressor Ctcf within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
SG A:CYS21 2.3 0.0 1.0
NE2 A:HIS39 2.3 0.0 1.0
NE2 A:HIS34 2.4 0.0 1.0
SG A:CYS18 2.4 0.0 1.0
HD2 A:HIS34 3.0 0.0 1.0
CD2 A:HIS34 3.0 0.0 1.0
H A:CYS21 3.1 0.0 1.0
CD2 A:HIS39 3.2 0.0 1.0
HB3 A:CYS18 3.2 0.0 1.0
HD2 A:HIS39 3.3 0.0 1.0
CB A:CYS18 3.3 0.0 1.0
HB2 A:HIS20 3.3 0.0 1.0
CE1 A:HIS39 3.4 0.0 1.0
HB3 A:CYS21 3.4 0.0 1.0
HB2 A:CYS18 3.5 0.0 1.0
CB A:CYS21 3.5 0.0 1.0
CE1 A:HIS34 3.5 0.0 1.0
HE1 A:HIS39 3.7 0.0 1.0
N A:CYS21 3.7 0.0 1.0
HB2 A:LYS23 3.8 0.0 1.0
HE1 A:HIS34 3.9 0.0 1.0
HB3 A:HIS20 4.2 0.0 1.0
CB A:HIS20 4.2 0.0 1.0
HD2 A:PHE35 4.2 0.0 1.0
HA A:PHE35 4.2 0.0 1.0
CA A:CYS21 4.2 0.0 1.0
CG A:HIS34 4.3 0.0 1.0
CG A:HIS39 4.3 0.0 1.0
ND1 A:HIS39 4.4 0.0 1.0
HB2 A:CYS21 4.4 0.0 1.0
H A:HIS20 4.5 0.0 1.0
HG3 A:LYS23 4.5 0.0 1.0
ND1 A:HIS34 4.5 0.0 1.0
C A:HIS20 4.6 0.0 1.0
HB2 A:PHE35 4.6 0.0 1.0
HD11 A:LEU31 4.7 0.0 1.0
CA A:CYS18 4.7 0.0 1.0
HZ A:PHE25 4.7 0.0 1.0
CA A:HIS20 4.8 0.0 1.0
H A:LYS23 4.8 0.0 1.0
HE1 A:PHE25 4.8 0.0 1.0
C A:CYS21 4.8 0.0 1.0
N A:HIS20 4.8 0.0 1.0
CD2 A:PHE35 4.8 0.0 1.0
CB A:LYS23 4.9 0.0 1.0
HD12 A:LEU31 4.9 0.0 1.0
O A:CYS21 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 1x6h

Go back to Zinc Binding Sites List in 1x6h
Zinc binding site 2 out of 2 in the Solution Structures of the C2H2 Type Zinc Finger Domain of Human Transcriptional Repressor Ctcf


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structures of the C2H2 Type Zinc Finger Domain of Human Transcriptional Repressor Ctcf within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.0
occ:1.00
SG A:CYS70 2.3 0.0 1.0
SG A:CYS53 2.3 0.0 1.0
SG A:CYS50 2.4 0.0 1.0
NE2 A:HIS66 2.4 0.0 1.0
H A:CYS53 2.9 0.0 1.0
HB2 A:LYS52 3.1 0.0 1.0
CD2 A:HIS66 3.2 0.0 1.0
HB3 A:CYS50 3.2 0.0 1.0
CB A:CYS50 3.2 0.0 1.0
HD2 A:HIS66 3.3 0.0 1.0
HB2 A:CYS70 3.3 0.0 1.0
HB2 A:CYS50 3.4 0.0 1.0
CE1 A:HIS66 3.4 0.0 1.0
CB A:CYS70 3.4 0.0 1.0
HB3 A:CYS53 3.5 0.0 1.0
CB A:CYS53 3.5 0.0 1.0
H A:GLY54 3.5 0.0 1.0
N A:CYS53 3.6 0.0 1.0
HB2 A:LYS55 3.7 0.0 1.0
HE1 A:HIS66 3.7 0.0 1.0
HB3 A:CYS70 3.9 0.0 1.0
H A:LYS55 3.9 0.0 1.0
HD2 A:LYS55 3.9 0.0 1.0
H A:LYS52 3.9 0.0 1.0
HA A:ALA67 4.0 0.0 1.0
HE1 A:PHE57 4.1 0.0 1.0
CA A:CYS53 4.2 0.0 1.0
CB A:LYS52 4.2 0.0 1.0
HZ1 A:LYS55 4.2 0.0 1.0
CG A:HIS66 4.3 0.0 1.0
HB2 A:CYS53 4.4 0.0 1.0
ND1 A:HIS66 4.4 0.0 1.0
N A:GLY54 4.4 0.0 1.0
H A:SER51 4.5 0.0 1.0
C A:LYS52 4.5 0.0 1.0
N A:LYS52 4.6 0.0 1.0
HB3 A:LYS52 4.6 0.0 1.0
CA A:LYS52 4.7 0.0 1.0
HZ A:PHE57 4.7 0.0 1.0
CA A:CYS50 4.7 0.0 1.0
HG3 A:LYS55 4.7 0.0 1.0
CB A:LYS55 4.7 0.0 1.0
CA A:CYS70 4.7 0.0 1.0
N A:LYS55 4.8 0.0 1.0
HA A:CYS70 4.8 0.0 1.0
HD2 A:LYS52 4.8 0.0 1.0
C A:CYS53 4.9 0.0 1.0
CD A:LYS55 4.9 0.0 1.0
HG3 A:LYS52 5.0 0.0 1.0
HA2 A:GLY72 5.0 0.0 1.0
CE1 A:PHE57 5.0 0.0 1.0
HA A:CYS50 5.0 0.0 1.0

Reference:

M.Sato, K.Saito, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama. Solution Structures of the C2H2 Type Zinc Finger Domain of Human Transcriptional Repressor Ctcf To Be Published.
Page generated: Wed Oct 16 20:19:02 2024

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy