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Zinc in PDB 1x64: Solution Structure of the Lim Domain of Alpha-Actinin-2 Associated Lim Protein

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structure of the Lim Domain of Alpha-Actinin-2 Associated Lim Protein (pdb code 1x64). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Solution Structure of the Lim Domain of Alpha-Actinin-2 Associated Lim Protein, PDB code: 1x64:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 1x64

Go back to Zinc Binding Sites List in 1x64
Zinc binding site 1 out of 2 in the Solution Structure of the Lim Domain of Alpha-Actinin-2 Associated Lim Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structure of the Lim Domain of Alpha-Actinin-2 Associated Lim Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:0.0
occ:1.00
ND1 A:HIS48 2.1 0.0 1.0
SG A:CYS31 2.3 0.0 1.0
SG A:CYS51 2.3 0.0 1.0
SG A:CYS28 2.4 0.0 1.0
HB2 A:HIS48 2.6 0.0 1.0
CG A:HIS48 3.0 0.0 1.0
CE1 A:HIS48 3.1 0.0 1.0
HB3 A:CYS28 3.2 0.0 1.0
CB A:CYS28 3.2 0.0 1.0
H A:CYS31 3.2 0.0 1.0
HB2 A:CYS28 3.3 0.0 1.0
CB A:HIS48 3.3 0.0 1.0
HE1 A:HIS48 3.3 0.0 1.0
HB3 A:LYS30 3.4 0.0 1.0
HB2 A:CYS51 3.4 0.0 1.0
CB A:CYS51 3.5 0.0 1.0
HB3 A:CYS31 3.5 0.0 1.0
CB A:CYS31 3.5 0.0 1.0
H A:HIS48 3.6 0.0 1.0
HB3 A:CYS51 3.8 0.0 1.0
HB3 A:HIS48 3.9 0.0 1.0
N A:CYS31 3.9 0.0 1.0
CD2 A:HIS48 4.1 0.0 1.0
NE2 A:HIS48 4.1 0.0 1.0
HB2 A:SER33 4.2 0.0 1.0
CA A:CYS31 4.3 0.0 1.0
HB2 A:CYS31 4.4 0.0 1.0
N A:HIS48 4.4 0.0 1.0
CA A:HIS48 4.5 0.0 1.0
CB A:LYS30 4.5 0.0 1.0
H A:SER33 4.5 0.0 1.0
HG2 A:LYS30 4.5 0.0 1.0
H A:LYS30 4.6 0.0 1.0
H A:CYS51 4.7 0.0 1.0
CA A:CYS28 4.7 0.0 1.0
HG12 A:ILE35 4.8 0.0 1.0
CA A:CYS51 4.8 0.0 1.0
C A:CYS31 4.9 0.0 1.0
C A:LYS30 4.9 0.0 1.0

Zinc binding site 2 out of 2 in 1x64

Go back to Zinc Binding Sites List in 1x64
Zinc binding site 2 out of 2 in the Solution Structure of the Lim Domain of Alpha-Actinin-2 Associated Lim Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structure of the Lim Domain of Alpha-Actinin-2 Associated Lim Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:0.0
occ:1.00
ND1 A:HIS78 2.1 0.0 1.0
SG A:CYS57 2.2 0.0 1.0
SG A:CYS75 2.3 0.0 1.0
SG A:CYS54 2.4 0.0 1.0
HB2 A:HIS78 2.9 0.0 1.0
CE1 A:HIS78 3.0 0.0 1.0
H A:CYS75 3.1 0.0 1.0
H A:CYS57 3.1 0.0 1.0
CG A:HIS78 3.1 0.0 1.0
HE1 A:HIS78 3.1 0.0 1.0
CB A:CYS54 3.3 0.0 1.0
HB2 A:CYS54 3.3 0.0 1.0
HB3 A:ASP56 3.3 0.0 1.0
HB3 A:CYS54 3.3 0.0 1.0
HB3 A:CYS75 3.4 0.0 1.0
CB A:HIS78 3.5 0.0 1.0
CB A:CYS75 3.5 0.0 1.0
CB A:CYS57 3.5 0.0 1.0
HB3 A:CYS57 3.5 0.0 1.0
H A:HIS78 3.7 0.0 1.0
N A:CYS57 3.7 0.0 1.0
H A:ASP56 3.9 0.0 1.0
N A:CYS75 3.9 0.0 1.0
HD1 A:TYR74 4.0 0.0 1.0
NE2 A:HIS78 4.1 0.0 1.0
HB2 A:LEU59 4.2 0.0 1.0
HB3 A:HIS78 4.2 0.0 1.0
CD2 A:HIS78 4.2 0.0 1.0
CA A:CYS57 4.2 0.0 1.0
CB A:ASP56 4.2 0.0 1.0
CA A:CYS75 4.3 0.0 1.0
HB2 A:CYS75 4.4 0.0 1.0
HB2 A:CYS57 4.4 0.0 1.0
H A:ASN58 4.4 0.0 1.0
H A:LEU59 4.4 0.0 1.0
HB A:THR77 4.4 0.0 1.0
HB2 A:ASP56 4.4 0.0 1.0
N A:HIS78 4.5 0.0 1.0
HA A:TYR74 4.5 0.0 1.0
C A:ASP56 4.6 0.0 1.0
CA A:HIS78 4.7 0.0 1.0
N A:ASP56 4.7 0.0 1.0
CA A:CYS54 4.7 0.0 1.0
H A:ALA55 4.7 0.0 1.0
HB3 A:TYR74 4.7 0.0 1.0
CA A:ASP56 4.8 0.0 1.0
HH21 A:ARG82 4.9 0.0 1.0
N A:ASN58 4.9 0.0 1.0
H A:ALA79 5.0 0.0 1.0
HE2 A:HIS78 5.0 0.0 1.0
C A:CYS57 5.0 0.0 1.0
HB3 A:LEU59 5.0 0.0 1.0

Reference:

X.R.Qin, F.Hayashi, S.Yokoyama. Solution Structure of the Lim Domain of Alpha-Actinin-2 Associated Lim Protein To Be Published.
Page generated: Wed Oct 16 20:17:42 2024

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