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Zinc in PDB 1wwg: uc(Nmr) Structure Determined For Mlv Nc Complex with Rna Sequence Uaucug

Zinc Binding Sites:

The binding sites of Zinc atom in the uc(Nmr) Structure Determined For Mlv Nc Complex with Rna Sequence Uaucug (pdb code 1wwg). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the uc(Nmr) Structure Determined For Mlv Nc Complex with Rna Sequence Uaucug, PDB code: 1wwg:

Zinc binding site 1 out of 1 in 1wwg

Go back to Zinc Binding Sites List in 1wwg
Zinc binding site 1 out of 1 in the uc(Nmr) Structure Determined For Mlv Nc Complex with Rna Sequence Uaucug


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of uc(Nmr) Structure Determined For Mlv Nc Complex with Rna Sequence Uaucug within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn57

b:0.0
occ:1.00
NE2 A:HIS34 2.0 0.0 1.0
SG A:CYS39 2.3 0.0 1.0
SG A:CYS29 2.3 0.0 1.0
SG A:CYS26 2.3 0.0 1.0
H A:CYS29 2.9 0.0 1.0
HB2 A:CYS39 2.9 0.0 1.0
CD2 A:HIS34 3.0 0.0 1.0
CE1 A:HIS34 3.0 0.0 1.0
CB A:CYS39 3.1 0.0 1.0
CB A:CYS26 3.1 0.0 1.0
HD2 A:PRO40 3.1 0.0 1.0
HA A:CYS39 3.1 0.0 1.0
HB2 A:CYS26 3.1 0.0 1.0
HB3 A:TYR28 3.1 0.0 1.0
HB3 A:CYS26 3.2 0.0 1.0
HD2 A:HIS34 3.2 0.0 1.0
HE1 A:HIS34 3.2 0.0 1.0
HB3 A:GLU31 3.3 0.0 1.0
HB3 A:CYS29 3.5 0.0 1.0
CB A:CYS29 3.5 0.0 1.0
CA A:CYS39 3.7 0.0 1.0
H A:GLU31 3.7 0.0 1.0
N A:CYS29 3.8 0.0 1.0
HA A:ALA36 3.9 0.0 1.0
HD3 A:PRO40 3.9 0.0 1.0
CD A:PRO40 4.0 0.0 1.0
HB3 A:CYS39 4.1 0.0 1.0
HB2 A:GLU31 4.1 0.0 1.0
H A:LYS30 4.1 0.0 1.0
ND1 A:HIS34 4.1 0.0 1.0
CG A:HIS34 4.1 0.0 1.0
CA A:CYS29 4.2 0.0 1.0
CB A:GLU31 4.2 0.0 1.0
CB A:TYR28 4.2 0.0 1.0
H A:TYR28 4.3 0.0 1.0
HD2 A:TYR28 4.3 0.0 1.0
HB2 A:LYS41 4.4 0.0 1.0
HB2 A:CYS29 4.4 0.0 1.0
H A:LYS41 4.5 0.0 1.0
HB2 A:TYR28 4.5 0.0 1.0
CA A:CYS26 4.6 0.0 1.0
N A:GLU31 4.6 0.0 1.0
C A:CYS39 4.7 0.0 1.0
N A:PRO40 4.7 0.0 1.0
N A:LYS30 4.7 0.0 1.0
N A:CYS39 4.7 0.0 1.0
O A:TRP35 4.7 0.0 1.0
C A:TYR28 4.8 0.0 1.0
HA A:CYS26 4.9 0.0 1.0
CA A:ALA36 4.9 0.0 1.0
C A:CYS29 4.9 0.0 1.0
CA A:TYR28 5.0 0.0 1.0
N A:TYR28 5.0 0.0 1.0
H A:CYS39 5.0 0.0 1.0
CD2 A:TYR28 5.0 0.0 1.0

Reference:

A.Dey, D.York, A.Smalls-Mantey, M.F.Summers. Composition and Sequence-Dependent Binding of Rna to the Nucleocapsid Protein of Moloney Murine Leukemia Virus(,) Biochemistry V. 44 3735 2005.
ISSN: ISSN 0006-2960
PubMed: 15751950
DOI: 10.1021/BI047639Q
Page generated: Wed Oct 16 20:12:31 2024

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